Lineage for d2ccva1 (2ccv A:1-99)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.154: HPA-like [141085] (1 superfamily)
    sandwich, 6 strands in 2 sheets; jelly-roll (truncated); also includes the pending PCSK9 V domain-like superfamily (the C-terminal domains of 2p4e and 2pmw)
  4. Superfamily b.154.1: Agglutinin HPA-like [141086] (1 family) (S)
    forms similar trimers to the PCSK9 V domain; strand directions of the subunit beta-sheets are parallel to the three-fold symmetry axis;
  5. Family b.154.1.1: Agglutinin HPA-like [141087] (2 proteins)
  6. Protein Agglutinin HPA [141088] (1 species)
  7. Species Roman snail (Helix pomatia) [TaxId:6536] [141089] (2 PDB entries)
    Uniprot Q2F1K8 21-119! Uniprot Q2F1K8 21-120
  8. Domain d2ccva1: 2ccv A:1-99 [130258]
    complexed with a2g, act, gol, nag, zn

Details for d2ccva1

PDB Entry: 2ccv (more details), 1.3 Å

PDB Description: structure of helix pomatia agglutinin with zinc and n-acetyl-alpha-d- galactoseamine (galnac)
PDB Compounds: (A:) helix pomatia agglutinin

SCOPe Domain Sequences for d2ccva1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ccva1 b.154.1.1 (A:1-99) Agglutinin HPA {Roman snail (Helix pomatia) [TaxId: 6536]}

SCOPe Domain Coordinates for d2ccva1 are not available.

Timeline for d2ccva1: