SCOP 1.73: Domain d2ca1b1: 2ca1 B:225-326

Lineage for d2ca1b1 (2ca1 B:225-326)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.254: Nucleocapsid protein dimerization domain [103067] (1 superfamily)
   dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta

4. Superfamily d.254.1: Nucleocapsid protein dimerization domain [103068] (2 families)

5. Family d.254.1.2: Coronavirus nucleocapsid protein [143508] (1 protein)
   C-terminal part of Pfam PF00937

6. Protein Coronavirus nucleocapsid protein [143509] (2 species)

7. Species Avian infectious bronchitis virus [TaxId:11120] [143510] (3 PDB entries)
   different strains

8. Domain d2ca1b1: 2ca1 B:225-326 [130148]
   automatically matched to 2CA1 A:218-326

Details for d2ca1b1

PDB Entry: 2ca1, 2.6 Å

PDB Description: crystal structure of the ibv coronavirus nucleocapsid

PDB Compounds: (B:) nucleocapsid protein

SCOP Domain Sequences for d2ca1b1:

Sequence; same for both SEQRES and ATOM records:

>d2ca1b1 d.254.1.2 (B:225-326) Coronavirus nucleocapsid protein {Avian infectious bronchitis virus [TaxId: 11120]}
rryckrtippnyrvdqvfgprtkgkegnfgddkmneegikdgrvtamlnlvpsshaclfg
srvtpklqldglhlrfefttvvpcddpqfdnyvkicdqcvdg

Timeline for d2ca1b1:

• d2ca1b1 is new in SCOP 1.73
  
• d2ca1b1 appears in SCOP 1.75
  
• d2ca1b1 appears in the current release, SCOPe 2.08, called d2ca1b_