Lineage for d2c8nd1 (2c8n D:4-16,D:387-502)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2066963Fold b.71: Glycosyl hydrolase domain [51010] (1 superfamily)
    folded sheet; greek-key
  4. 2066964Superfamily b.71.1: Glycosyl hydrolase domain [51011] (6 families) (S)
    this domain is C-terminal to the catalytic beta/alpha barrel domain
  5. 2067378Family b.71.1.2: Composite domain of glycosyl hydrolase families 5, 30, 39 and 51 [89388] (4 protein domains)
    interrupted by the catalytic domain; the C-terminal core is similar to the alpha-amylase domain
  6. 2067379Protein Alpha-l-arabinofuranosidase [101924] (2 species)
    glycosyl hydrolase family 51
  7. 2067389Species Clostridium thermocellum [TaxId:1515] [141554] (2 PDB entries)
    Uniprot Q4CJG5 2-16,387-502
  8. 2067393Domain d2c8nd1: 2c8n D:4-16,D:387-502 [130115]
    Other proteins in same PDB: d2c8na2, d2c8nb2, d2c8nc2, d2c8nd2, d2c8ne2, d2c8nf2
    automated match to d2c7fa1
    complexed with edo

Details for d2c8nd1

PDB Entry: 2c8n (more details), 2.9 Å

PDB Description: the structure of a family 51 arabinofuranosidase, araf51, from clostridium thermocellum in complex with 1,3-linked arabinoside of xylobiose.
PDB Compounds: (D:) alpha-l-arabinofuranosidase

SCOPe Domain Sequences for d2c8nd1:

Sequence, based on SEQRES records: (download)

>d2c8nd1 b.71.1.2 (D:4-16,D:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]}

Sequence, based on observed residues (ATOM records): (download)

>d2c8nd1 b.71.1.2 (D:4-16,D:387-502) Alpha-l-arabinofuranosidase {Clostridium thermocellum [TaxId: 1515]}

SCOPe Domain Coordinates for d2c8nd1:

Click to download the PDB-style file with coordinates for d2c8nd1.
(The format of our PDB-style files is described here.)

Timeline for d2c8nd1: