Lineage for d2c42b1 (2c42 B:2-258)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108512Family c.36.1.8: PFOR Pyr module [88746] (1 protein)
    domains VI, I and II are arranged in the same way as the TK PP, Pyr and C domains
    automatically mapped to Pfam PF01855
  6. 2108513Protein Pyruvate-ferredoxin oxidoreductase, PFOR, domain I [88747] (1 species)
  7. 2108514Species Desulfovibrio africanus [TaxId:873] [88748] (10 PDB entries)
  8. 2108516Domain d2c42b1: 2c42 B:2-258 [129795]
    Other proteins in same PDB: d2c42a2, d2c42a3, d2c42a4, d2c42a5, d2c42b2, d2c42b3, d2c42b4, d2c42b5
    automated match to d1keka1
    complexed with ca, mg, pyr, sf4, tpp

Details for d2c42b1

PDB Entry: 2c42 (more details), 1.78 Å

PDB Description: Crystal Structure Of Pyruvate-Ferredoxin Oxidoreductase From Desulfovibrio africanus
PDB Compounds: (B:) pyruvate-ferredoxin oxidoreductase

SCOPe Domain Sequences for d2c42b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2c42b1 c.36.1.8 (B:2-258) Pyruvate-ferredoxin oxidoreductase, PFOR, domain I {Desulfovibrio africanus [TaxId: 873]}

SCOPe Domain Coordinates for d2c42b1:

Click to download the PDB-style file with coordinates for d2c42b1.
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Timeline for d2c42b1: