Lineage for d2c1wa1 (2c1w A:6-289)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3009981Fold d.294: EndoU-like [142876] (1 superfamily)
    comprises several helices and two three-stranded antiparallel beta-sheets; similar architecture to the RNase A-like fold (54075)
  4. 3009982Superfamily d.294.1: EndoU-like [142877] (3 families) (S)
    similarity to the RNase A-like superfamily (54076) extends to the active site location and architecture; the two structural cores of the RNase A and EndoU superfamilies are interrelated by a topological permutation - transposition of two pereferial beta-strands, suggesting possible distant homology of the two superfamilies (and their unification in a hyperfamily)
  5. 3009983Family d.294.1.1: Eukaryotic EndoU ribonuclease [142878] (2 proteins)
    PfamB PB010233; common fold decorated with additional structures
    automatically mapped to Pfam PF09412
  6. 3009984Protein EndoU [142879] (1 species)
  7. 3009985Species African clawed frog (Xenopus laevis) [TaxId:8355] [142880] (1 PDB entry)
    Uniprot Q8JFY9 6-289
  8. 3009986Domain d2c1wa1: 2c1w A:6-289 [129644]
    Other proteins in same PDB: d2c1wb_, d2c1wc_
    complexed with po4

Details for d2c1wa1

PDB Entry: 2c1w (more details), 2.2 Å

PDB Description: the structure of xendou: a splicing independent snorna processing endoribonuclease
PDB Compounds: (A:) endou protein

SCOPe Domain Sequences for d2c1wa1:

Sequence, based on SEQRES records: (download)

>d2c1wa1 d.294.1.1 (A:6-289) EndoU {African clawed frog (Xenopus laevis) [TaxId: 8355]}

Sequence, based on observed residues (ATOM records): (download)

>d2c1wa1 d.294.1.1 (A:6-289) EndoU {African clawed frog (Xenopus laevis) [TaxId: 8355]}

SCOPe Domain Coordinates for d2c1wa1:

Click to download the PDB-style file with coordinates for d2c1wa1.
(The format of our PDB-style files is described here.)

Timeline for d2c1wa1: