SCOPe 2.08: Domain d2bxxa1: 2bxx A:29-160

Lineage for d2bxxa1 (2bxx A:29-160)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.148: Coronavirus RNA-binding domain [110303] (1 superfamily)
   coiled antiparallel beta-sheet of 5 strands, order 51324; complex topology, crossing loops

4. Superfamily b.148.1: Coronavirus RNA-binding domain [110304] (1 family)
   automatically mapped to Pfam PF00937

5. Family b.148.1.1: Coronavirus RNA-binding domain [110305] (1 protein)
   N-terminal part of Pfam PF00937

6. Protein Nucleocapsid protein [110306] (2 species)

7. Species Avian infectious bronchitis virus [TaxId:11120] [141560] (4 PDB entries)
   Uniprot P32923 23-160! Uniprot P69596 29-160! Uniprot P69597 29-160
   different strains

8. Domain d2bxxa1: 2bxx A:29-160 [129446]

Details for d2bxxa1

PDB Entry: 2bxx, 1.85 Å

PDB Description: crystal structure of the n-terminal domain of ibv coronavirus nucleocapsid. native crystal form

PDB Compounds: (A:) nucleocapsid protein

SCOPe Domain Sequences for d2bxxa1:

Sequence; same for both SEQRES and ATOM records:

>d2bxxa1 b.148.1.1 (A:29-160) Nucleocapsid protein {Avian infectious bronchitis virus [TaxId: 11120]}
ssgnaswfqaikakklntpppkfegsgvpdnenikpsqqhgywrrqarfkpgkggrcpvp
dawyfyytgtgpaadlnwgdtqdgivwvaakgadtksrsnqgtrdpdkfdqyplrfsdgg
pdgnfrwdfipl

Timeline for d2bxxa1:

• d2bxxa1 first appeared in SCOP 1.73
  
• d2bxxa1 appears in SCOPe 2.07