SCOPe 2.06: Domain d2bw3a2: 2bw3 A:163-609

Lineage for d2bw3a2 (2bw3 A:163-609)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
   consists of one domain of this fold

5. Family c.55.3.12: Hermes transposase-like [142508] (1 protein)

6. Protein Transposase Hermes, catalytic domain [142509] (1 species)

7. Species House fly (Musca domestica) [TaxId:7370] [142510] (1 PDB entry)
   Uniprot Q25442 163-609

8. Domain d2bw3a2: 2bw3 A:163-609 [129318]
   Other proteins in same PDB: d2bw3a1, d2bw3b1

Details for d2bw3a2

PDB Entry: 2bw3, 2 Å

PDB Description: three-dimensional structure of the hermes dna transposase

PDB Compounds: (A:) transposase

SCOPe Domain Sequences for d2bw3a2:

Sequence, based on SEQRES records:

>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain {House fly (Musca domestica) [TaxId: 7370]}
greiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstae
niykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetp
elnmpilacknivkyfkkanlqhrlrsslksecptrwnstytmlrsildnwesviqilse
agetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgd
vadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedle
linrmssfnelsatqlnqsdsnshnsidltshskdisttsfffpqltqnnsreppvcpsd
efefyrkeivilsedfkvmewwnlnskkypklsklalsllsipassaasertfslagnii
tekrnrigqqtvdsllflnsfyknfck

Sequence, based on observed residues (ATOM records):

>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain {House fly (Musca domestica) [TaxId: 7370]}
greiksavekdgasatidlwtdnyikrnflgvtlhyhennelrdlilglksldferstae
niykklkaifsqfnvedlssikfvtdrganvvkslannirincsshllsnvlensfeetp
elnmpilacknivkyfkkanlqhrlrsslksecptrwnstytmlrsildnwesviqilse
agetqrivhinksiiqtmvnildgferifkelqtcsspslcfvvpsilkvkeicspdvgd
vadiaklkvniiknvriiweenlsiwhytafffyppalhmqqekvaqikefclskmedle
linrmssfnelsatqlnqdisttsfffpqltqnnsreppvcpsdefefyrkeivilsedf
kvmewwnlnskkypklsklalsllsipassaasertfslagniitekrnrigqqtvdsll
flnsfyknfck

Timeline for d2bw3a2:

• d2bw3a2 first appeared in SCOP 1.73
  
• d2bw3a2 appears in SCOPe 2.05
  
• d2bw3a2 appears in SCOPe 2.07
  
• d2bw3a2 appears in the current release, SCOPe 2.08