SCOP 1.73: Domain d2bvio1: 2bvi O:5-636

Lineage for d2bvio1 (2bvi O:5-636)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.2: Group II dsDNA viruses VP [49749] (3 families)
   duplication: consists of two domains of this fold packed together like the nucleoplasmin subunits
   trimeric; in the trimers, the domains are arranged around pseudo six-fold axis

5. Family b.121.2.2: Adenovirus hexon [49753] (1 protein)
   each domain is heavily decorated with many insertions

6. Protein Adenovirus hexon [63404] (2 species)

7. Species Human adenovirus type 5 [TaxId:28285] [49756] (2 PDB entries)

8. Domain d2bvio1: 2bvi O:5-636 [129276]
   automatically matched to d1p30a1

Details for d2bvio1

PDB Entry: 2bvi

PDB Description: The quasi-atomic model of Human Adenovirus type 5 capsid (Part 1)

PDB Compounds: (O:) hexon protein

SCOP Domain Sequences for d2bvio1:

Sequence, based on SEQRES records:

>d2bvio1 b.121.2.2 (O:5-636) Adenovirus hexon {Human adenovirus type 5 [TaxId: 28285]}
mmpqwsymhisgqdaseylspglvqfaratetyfslnnkfrnptvapthdvttdrsqrlt
lrfipvdredtaysykarftlavgdnrvldmastyfdirgvldrgptfkpysgtaynala
pkgapnpcewdeaataleinleeedddnedevdeqaeqqkthvfgqapysginitkegiq
igvegqtpkyadktfqpepqigesqwyeteinhaagrvlkkttpmkpcygsyakptneng
gqgilvkqqngklesqvemqffstteatagngdnltpkvvlysedvdietpdthisympt
ikegnsrelmgqqsmpnrpnyiafrdnfiglmyynstgnmgvlagqasqlnavvdlqdrn
telsyqllldsigdrtryfsmwnqavdsydpdvriienhgtedelpnycfplggvintet
ltkvkpktgqengwekdatefsdkneirvgnnfameinlnanlwrnflysnialylpdkl
kyspsnvkisdnpntydymnkrvvapglvdcyinlgarwsldymdnvnpfnhhrnaglry
rsmllgngryvpfhiqvpqkffaiknllllpgsytyewnfrkdvnmvlqsslgndlrvdg
asikfdsiclyatffpmahntastleamlrnd

Sequence, based on observed residues (ATOM records):

>d2bvio1 b.121.2.2 (O:5-636) Adenovirus hexon {Human adenovirus type 5 [TaxId: 28285]}
mmpqwsymhisgqdaseylspglvqfaratetyfslnnkfrnptvapthdvttdrsqrlt
lrfipvdredtaysykarftlavgdnrvldmastyfdirgvldrgptfkpysgtaynala
pkgapnpcewdthvfgqapysginitkegiqigkyadktfqpepqigesqwyeteinhaa
grvlkkttpmkpcygsyakptnenggqgilvesqvemqffsttnltpkvvlysedvdiet
pdthisymptikegnsrelmgqqsmpnrpnyiafrdnfiglmyynstgnmgvlagqasql
navvdlqdrntelsyqllldsigdrtryfsmwnqavdsydpdvriienhgtedelpnycf
plggvintetltkvkpgwekdafsdkneirvgnnfameinlnanlwrnflysnialylpd
klkyspsnvkisdnpntydymnkrvvapglvdcyinlgarwsldymdnvnpfnhhrnagl
ryrsmllgngryvpfhiqvpqkffaiknllllpgsytyewnfrkdvnmvlqsslgndlrv
dgasikfdsiclyatffpmahntastleamlrnd

Timeline for d2bvio1:

• d2bvio1 is new in SCOP 1.73
  
• d2bvio1 appears in SCOP 1.75
  
• d2bvio1 appears in the current release, SCOPe 2.08