Lineage for d2bh2b1 (2bh2 B:16-74)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1540029Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 1541119Superfamily b.40.4: Nucleic acid-binding proteins [50249] (17 families) (S)
  5. 1542118Family b.40.4.12: TRAM domain [101768] (3 proteins)
    Pfam PF01938
  6. 1542125Protein rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain [101769] (1 species)
  7. 1542126Species Escherichia coli [TaxId:562] [101770] (2 PDB entries)
  8. 1542129Domain d2bh2b1: 2bh2 B:16-74 [128512]
    Other proteins in same PDB: d2bh2a2, d2bh2b2
    automatically matched to d1uwva1
    protein/RNA complex; complexed with sah, sf4

Details for d2bh2b1

PDB Entry: 2bh2 (more details), 2.15 Å

PDB Description: crystal structure of e. coli 5-methyluridine methyltransferase ruma in complex with ribosomal rna substrate and s-adenosylhomocysteine.
PDB Compounds: (B:) 23s rRNA (uracil-5-)-methyltransferase ruma

SCOPe Domain Sequences for d2bh2b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bh2b1 b.40.4.12 (B:16-74) rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain {Escherichia coli [TaxId: 562]}
iitvsvndldsfgqgvarhngktlfipgllpqenaevtvtedkkqyarakvvrrlsdsp

SCOPe Domain Coordinates for d2bh2b1:

Click to download the PDB-style file with coordinates for d2bh2b1.
(The format of our PDB-style files is described here.)

Timeline for d2bh2b1:

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d2bh2b2