Lineage for d2bh2a2 (2bh2 A:75-432)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2129295Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest
  4. 2129296Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (60 families) (S)
  5. 2130262Family c.66.1.40: (Uracil-5-)-methyltransferase [102581] (1 protein)
    Pfam PF05958
  6. 2130263Protein rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain [102582] (1 species)
    includes an iron-sulfur cluster-binding, alpha+beta sudbomain
  7. 2130264Species Escherichia coli [TaxId:562] [102583] (2 PDB entries)
  8. 2130266Domain d2bh2a2: 2bh2 A:75-432 [128511]
    Other proteins in same PDB: d2bh2a1, d2bh2b1
    automatically matched to d1uwva2
    protein/RNA complex; complexed with sah, sf4

Details for d2bh2a2

PDB Entry: 2bh2 (more details), 2.15 Å

PDB Description: crystal structure of e. coli 5-methyluridine methyltransferase ruma in complex with ribosomal rna substrate and s-adenosylhomocysteine.
PDB Compounds: (A:) 23s rRNA (uracil-5-)-methyltransferase ruma

SCOPe Domain Sequences for d2bh2a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bh2a2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2bh2a2:

Click to download the PDB-style file with coordinates for d2bh2a2.
(The format of our PDB-style files is described here.)

Timeline for d2bh2a2:

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