SCOPe 2.07: Domain d2bfgg2: 2bfg G:14-360

Lineage for d2bfgg2 (2bfg G:14-360)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.3: beta-glycanases [51487] (27 proteins)
   consist of a number of sequence families

6. Protein Beta-D-xylosidase, catalytic domain [102077] (2 species)
   glycosyl hydrolase family 39

7. Species Bacillus stearothermophilus [TaxId:1422] [141780] (3 PDB entries)
   Uniprot Q9ZFM2 15-361

8. Domain d2bfgg2: 2bfg G:14-360 [128436]
   Other proteins in same PDB: d2bfga1, d2bfgb1, d2bfgc1, d2bfgd1, d2bfge1, d2bfgf1, d2bfgg1, d2bfgh1
   automated match to d2bfga2
   complexed with anx, na, so4, xys

Details for d2bfgg2

PDB Entry: 2bfg, 2.4 Å

PDB Description: crystal structure of beta-xylosidase (fam gh39) in complex with dinitrophenyl-beta-xyloside and covalently bound xyloside

PDB Compounds: (G:) beta-xylosidase

SCOPe Domain Sequences for d2bfgg2:

Sequence; same for both SEQRES and ATOM records:

>d2bfgg2 c.1.8.3 (G:14-360) Beta-D-xylosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]}
fkknwkfcvgtgrlglalqkeyldhlklvqekigfryirghgllsddvgiyreveidgem
kpfynftyidrivdsylalnirpfiefgfmpkalasgdqtvfywkgnvtppkdynkwrdl
ivavvshfierygieevrtwlfevwnapnlvnfwkdankqeyfklyevtaravksvdphl
qvggpaicggsdewitdflhfcaerrvpvdfvsrhaytskaphkktfeyyyqeleppedm
leqfktvralirqspfphlplhiteyntsyspinpvhdtalnaayiarilseggdyvdsf
sywtfsdvfeemdvpkalfhggfglvalhsipkptfhaftffnalgd

Timeline for d2bfgg2:

• d2bfgg2 first appeared in SCOP 1.73
  
• d2bfgg2 appears in SCOPe 2.06
  
• d2bfgg2 appears in the current release, SCOPe 2.08