Lineage for d2bera1 (2ber A:403-505)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1755446Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1770169Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 1771068Family b.1.18.0: automated matches [191341] (1 protein)
    not a true family
  6. 1771069Protein automated matches [190226] (43 species)
    not a true protein
  7. 1771236Species Micromonospora viridifaciens [TaxId:1881] [254942] (3 PDB entries)
  8. 1771237Domain d2bera1: 2ber A:403-505 [128386]
    Other proteins in same PDB: d2bera2, d2bera3
    automated match to d1w8oa1
    complexed with na, slb; mutant

Details for d2bera1

PDB Entry: 2ber (more details), 1.8 Å

PDB Description: y370g active site mutant of the sialidase from micromonospora viridifaciens in complex with beta-neu5ac (sialic acid).
PDB Compounds: (A:) bacterial sialidase

SCOPe Domain Sequences for d2bera1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2bera1 b.1.18.0 (A:403-505) automated matches {Micromonospora viridifaciens [TaxId: 1881]}

SCOPe Domain Coordinates for d2bera1:

Click to download the PDB-style file with coordinates for d2bera1.
(The format of our PDB-style files is described here.)

Timeline for d2bera1: