Lineage for d2bcoa1 (2bco A:4-342)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1860688Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 1861985Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families) (S)
    core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
  5. 1862365Family c.56.5.7: AstE/AspA-like [142526] (3 proteins)
    Pfam PF04952; Succinylglutamate desuccinylase / Aspartoacylase family; contains extra C-terminal domain, new variant of the Barrel-sandwich hybrid fold (51229)
  6. 1862381Protein Succinylglutamate desuccinylase AstE [142527] (4 species)
  7. 1862390Species Vibrio parahaemolyticus [TaxId:670] [142529] (1 PDB entry)
    Uniprot Q87Q40 4-342
  8. 1862391Domain d2bcoa1: 2bco A:4-342 [128302]
    complexed with zn

Details for d2bcoa1

PDB Entry: 2bco (more details), 2.33 Å

PDB Description: X-ray structure of succinylglutamate desuccinalase from Vibrio Parahaemolyticus (RIMD 2210633) at the resolution 2.3 A, Northeast Structural Genomics Target Vpr14
PDB Compounds: (A:) Succinylglutamate desuccinylase

SCOPe Domain Sequences for d2bcoa1:

Sequence, based on SEQRES records: (download)

>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE {Vibrio parahaemolyticus [TaxId: 670]}
slfrqsfltdtldvhidvapaeqvlsngvqlklyqrgvlevipenptqetkniiiscgih
gdetapmelvdsiikdiesgfqkvdarclfiiahpestlahtrfleenlnrlfdekehep
tkelaiadtlkllvrdfyqdtepktrwhldlhcairgskhytfavspktrhpvrskalvd
fldsahieavllsnspsstfswysaenysaqaltmelgrvarigenaldrltafdlalrn
liaeaqpehlskpcikyrvsrtivrlhddfdfmfddnvenftsfvhgevfghdgdkplma
kndneaivfpnrhvaigqraalmvcevktrfeegelvyd

Sequence, based on observed residues (ATOM records): (download)

>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE {Vibrio parahaemolyticus [TaxId: 670]}
slfrqsfltdtldvhivapaeqvlsngvqlklyqrgvlevipenptqetkniiiscgihg
detapmelvdsiikdiesgfqkvdarclfiiahpestlahtrfleenlnrlfdekehept
kelaiadtlkllvrdfyqdtepktrwhldlhcairgskhytfavspktrhpvrskalvdf
ldsahieavllsnspsstfswysaenysaqaltmelgrvarigenaldrltafdlalrnl
iaeaqpehlskpcikyrvsrtivrlhddfdfmfddnvenftsfvhgevfghdgdkplmak
ndneaivfpnrhvaigqraalmvcevktrfeegelvyd

SCOPe Domain Coordinates for d2bcoa1:

Click to download the PDB-style file with coordinates for d2bcoa1.
(The format of our PDB-style files is described here.)

Timeline for d2bcoa1: