Lineage for d2b4va1 (2b4v A:289-471)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2013910Fold a.160: PAP/OAS1 substrate-binding domain [81632] (1 superfamily)
    core: 5-helical bundle; up-and-down; right-handed twist
  4. 2013911Superfamily a.160.1: PAP/OAS1 substrate-binding domain [81631] (7 families) (S)
    this domain follows the catalytic nucleotidyltransferase domain
  5. 2013972Family a.160.1.4: RNA editing terminal uridyl transferase 2, RET2, domain 2 [140679] (1 protein)
  6. 2013973Protein RNA editing terminal uridyl transferase 2, TUTase 2, RET2 [140680] (1 species)
  7. 2013974Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [140681] (3 PDB entries)
    Uniprot Q86MV5 289-471
  8. 2013975Domain d2b4va1: 2b4v A:289-471 [127864]
    Other proteins in same PDB: d2b4va2
    protein/RNA complex; complexed with k

Details for d2b4va1

PDB Entry: 2b4v (more details), 1.8 Å

PDB Description: Structural Basis for UTP Specificity of RNA Editing TUTases From Trypanosoma Brucei
PDB Compounds: (A:) RNA editing complex protein MP57

SCOPe Domain Sequences for d2b4va1:

Sequence, based on SEQRES records: (download)

>d2b4va1 a.160.1.4 (A:289-471) RNA editing terminal uridyl transferase 2, TUTase 2, RET2 {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
pvaarhtamavkawgkatnvgagsgamltsyavtvmfiyyllvtrqvlwvdpwslphpah
lprypdfsplydcdptelgrllhgffifyahhfdyerevvslnrnrrsyrsdigwnfpqn
kkgtfsynfciedpyedvgtgglnlvrhlhpakfqlvkqeflraaqcmerflptnapeks
ilg

Sequence, based on observed residues (ATOM records): (download)

>d2b4va1 a.160.1.4 (A:289-471) RNA editing terminal uridyl transferase 2, TUTase 2, RET2 {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
pvaarhtamavkawgkatngamltsyavtvmfiyyllvtrqvlwvdpwslphpahlpryp
dfsplydcdptelgrllhgffifyahhfdyerevvslnrnrrsyrsdigwnfpqnkkgtf
synfciedpyedvgtgglnlvrhlhpakfqlvkqeflraaqcmerflptnapeksilg

SCOPe Domain Coordinates for d2b4va1:

Click to download the PDB-style file with coordinates for d2b4va1.
(The format of our PDB-style files is described here.)

Timeline for d2b4va1:

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Domains from same chain:
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d2b4va2