Lineage for d2b4tr1 (2b4t R:4-152,R:319-335)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2090218Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2090219Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2092282Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 protein domains)
    family members also share a common alpha+beta fold in C-terminal domain
  6. 2092523Protein Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801] (19 species)
  7. 2092611Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [141916] (4 PDB entries)
    Uniprot Q8IKK7 4-152,319-335! Uniprot Q8T6B1 1-152,319-337
  8. 2092623Domain d2b4tr1: 2b4t R:4-152,R:319-335 [127862]
    Other proteins in same PDB: d2b4to2, d2b4to3, d2b4tp2, d2b4tp3, d2b4tq2, d2b4tq3, d2b4tr2, d2b4tr3
    automated match to d2b4ro1
    complexed with aes, nad

Details for d2b4tr1

PDB Entry: 2b4t (more details), 2.5 Å

PDB Description: Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Plasmodium falciparum at 2.25 Angstrom resolution reveals intriguing extra electron density in the active site
PDB Compounds: (R:) glyceraldehyde-3-phosphate dehydrogenase

SCOPe Domain Sequences for d2b4tr1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2b4tr1 c.2.1.3 (R:4-152,R:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

SCOPe Domain Coordinates for d2b4tr1:

Click to download the PDB-style file with coordinates for d2b4tr1.
(The format of our PDB-style files is described here.)

Timeline for d2b4tr1: