SCOPe 2.05: Domain d2b1xc2: 2b1x C:163-441

Lineage for d2b1xc2 (2b1x C:163-441)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.129: TBP-like [55944] (11 superfamilies)
   beta-alpha-beta(4)-alpha

4. Superfamily d.129.3: Bet v1-like [55961] (11 families)
   contains a single copy of this fold with a alpha-beta2 insertion after the first helix; there is a cavity between the beta-sheet and the long C-terminal helix

5. Family d.129.3.3: Ring hydroxylating alpha subunit catalytic domain [55969] (6 proteins)
   Pfam PF00848; contains a few insertion and C-terminal extension compared with Bet v1

6. Protein Naphthalene 1,2-dioxygenase alpha subunit, C-domain [55970] (5 species)

7. Species Rhodococcus sp. ncimb12038 [TaxId:92694] [143822] (1 PDB entry)
   Uniprot Q9X3R9 163-441

8. Domain d2b1xc2: 2b1x C:163-441 [127679]
   Other proteins in same PDB: d2b1xa1, d2b1xb1, d2b1xc1, d2b1xd_, d2b1xe1, d2b1xf_
   automated match to d2b1xa2
   complexed with fe, fes, mpd

Details for d2b1xc2

PDB Entry: 2b1x, 2 Å

PDB Description: Crystal structure of naphthalene 1,2-dioxygenase from Rhodococcus sp.

PDB Compounds: (C:) naphthalene dioxygenase large subunit

SCOPe Domain Sequences for d2b1xc2:

Sequence; same for both SEQRES and ATOM records:

>d2b1xc2 d.129.3.3 (C:163-441) Naphthalene 1,2-dioxygenase alpha subunit, C-domain {Rhodococcus sp. ncimb12038 [TaxId: 92694]}
adsledylgdlkfyldivldrsdaglqvvgapqrwvidanwklgadnfvgdayhtmmthr
smvelglappdpqfalygehihtghghglgiigpppgmplpefmglpeniveelerrltp
eqveifrptafihgtvfpnlsignflmgkdhlsaptafltlrlwhplgpdkmevmsfflv
ekdapdwfkdesyksylrtfgisggfeqddaenwrsitrvmggqfaktgelnyqmgrgvl
epdpnwtgpgeaypldyaeanqrnfleywmqlmlaespl

Timeline for d2b1xc2:

• d2b1xc2 first appeared in SCOP 1.73
  
• d2b1xc2 appears in SCOPe 2.04
  
• d2b1xc2 appears in SCOPe 2.06
  
• d2b1xc2 appears in the current release, SCOPe 2.08