Lineage for d2b0ja1 (2b0j A:243-344)

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 645590Fold a.100: 6-phosphogluconate dehydrogenase C-terminal domain-like [48178] (1 superfamily)
    multihelical; common core is formed around two long antiparallel helices related by (pseudo) twofold symmetry
  4. 645591Superfamily a.100.1: 6-phosphogluconate dehydrogenase C-terminal domain-like [48179] (12 families) (S)
    N-terminal domain is Rossmann-fold with a family-specific C-terminal extension
  5. 645750Family a.100.1.11: HMD dimerization domain-like [140777] (1 protein)
    dimer similar to those of the GDP-mannose 6-dehydrogenase and class I KARI domains
  6. 645751Protein 5,10-methenyltetrahydromethanopterin hydrogenase, HMD [140778] (1 species)
  7. 645752Species Archaeon Methanocaldococcus jannaschii [TaxId:2190] [140779] (1 PDB entry)
  8. 645753Domain d2b0ja1: 2b0j A:243-344 [127639]
    Other proteins in same PDB: d2b0ja2

Details for d2b0ja1

PDB Entry: 2b0j (more details), 1.75 Å

PDB Description: The crystal structure of the apoenzyme of the iron-sulfur-cluster-free hydrogenase (Hmd)
PDB Compounds: (A:) 5,10-methenyltetrahydromethanopterin hydrogenase

SCOP Domain Sequences for d2b0ja1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2b0ja1 a.100.1.11 (A:243-344) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}
anligpvcdmcsavtatvyagllayrdavtkilgapadfaqmmadealtqihnlmkekgi
anmeealdpaallgtadsmcfgplaeilptalkvlekhkvve

SCOP Domain Coordinates for d2b0ja1:

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Timeline for d2b0ja1:

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Domains from same chain:
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d2b0ja2