Lineage for d2apoa1 (2apo A:247-331)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 680324Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 680325Superfamily b.122.1: PUA domain-like [88697] (10 families) (S)
  5. 680326Family b.122.1.1: PUA domain [88698] (5 proteins)
    RNA-binding domain
  6. 680349Protein Pseudouridine synthase II TruB, C-terminal domain [88699] (5 species)
  7. 680350Species Archaeon Methanococcus jannaschii [TaxId:2190] [141698] (1 PDB entry)
  8. 680351Domain d2apoa1: 2apo A:247-331 [127133]
    Other proteins in same PDB: d2apoa2, d2apob1
    complexed with k, zn

Details for d2apoa1

PDB Entry: 2apo (more details), 1.95 Å

PDB Description: Crystal Structure of the Methanococcus jannaschii Cbf5 Nop10 Complex
PDB Compounds: (A:) Probable tRNA pseudouridine synthase B

SCOP Domain Sequences for d2apoa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2apoa1 b.122.1.1 (A:247-331) Pseudouridine synthase II TruB, C-terminal domain {Archaeon Methanococcus jannaschii [TaxId: 2190]}
hlkkvvvkdsavdaichgadvyvrgiaklskgigkgetvlvetlkgeavavgkalmntke
ilnadkgvavdvervymdrgtyprm

SCOP Domain Coordinates for d2apoa1:

Click to download the PDB-style file with coordinates for d2apoa1.
(The format of our PDB-style files is described here.)

Timeline for d2apoa1:

Domains from same chain:
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d2apoa2
Domains from other chains:
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d2apob1