Lineage for d2aodb1 (2aod B:101-199)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 671907Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 671908Superfamily b.50.1: Acid proteases [50630] (2 families) (S)
  5. 671909Family b.50.1.1: Retroviral protease (retropepsin) [50631] (8 proteins)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 671925Protein Human immunodeficiency virus type 1 protease [50632] (1 species)
  7. 671926Species Human immunodeficiency virus type 1 [TaxId:11676] [50633] (230 PDB entries)
  8. 671966Domain d2aodb1: 2aod B:101-199 [127083]
    automatically matched to d1fgcc_
    complexed with 2ao, ace, dms, gol, nh2, olt; mutant

Details for d2aodb1

PDB Entry: 2aod (more details), 1.4 Å

PDB Description: crystal structure analysis of hiv-1 protease with a substrate analog p2-nc
PDB Compounds: (B:) Pol polyprotein

SCOP Domain Sequences for d2aodb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2aodb1 b.50.1.1 (B:101-199) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
pqitlwkrplvtikiggqlkealldtgaddtvieemslpgrwkpkmiggiggfikvrqyd
qiiieiaghkaigtvlvgptpvniigrnlltqigatlnf

SCOP Domain Coordinates for d2aodb1:

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Timeline for d2aodb1: