SCOPe 2.06: Domain d2amxb2: 2amx B:20-376

Lineage for d2amxb2 (2amx B:20-376)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families)
   the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
   has transition metal ions bound inside the barrel

5. Family c.1.9.1: Adenosine/AMP deaminase [51557] (3 proteins)

6. Protein automated matches [190078] (4 species)
   not a true protein

7. Species Plasmodium yoelii [TaxId:5861] [187410] (1 PDB entry)

8. Domain d2amxb2: 2amx B:20-376 [127025]
   Other proteins in same PDB: d2amxa1, d2amxa2, d2amxb3
   automated match to d2amxa1
   complexed with co, unx

Details for d2amxb2

PDB Entry: 2amx, 2.02 Å

PDB Description: Crystal structure of Plasmodium Yoelii Adenosine deaminase (PY02076)

PDB Compounds: (B:) adenosine deaminase

SCOPe Domain Sequences for d2amxb2:

Sequence, based on SEQRES records:

>d2amxb2 c.1.9.1 (B:20-376) automated matches {Plasmodium yoelii [TaxId: 5861]}
eikflkkedvqnidlngmskkeryeiwrripkvelhchldltfsaefflkwarkynlqpn
msddeildhylftkegkslaefirkaisvsdlyrdydfiedlakwaviekykegvvlmef
rysptfvsssygldvelihkafikgiknatellnnkihvalicisdtghaaasikhsgdf
aikhkhdfvgfdhggreidlkdhkdvyhsvrdhglhltvhagedatlpnlntlytainil
nverighgirvsesdelielvkkkdillevcpisnlllnnvksmdthpirklydagvkvs
vnsddpgmflsnindnyeklyihlnftleefmimnnwafeksfvsddvkselkalyf

Sequence, based on observed residues (ATOM records):

>d2amxb2 c.1.9.1 (B:20-376) automated matches {Plasmodium yoelii [TaxId: 5861]}
eikflkkedvqnidlngmskkeryeiwrripkvelhchldltfsaefflkwarkynlqpn
msddeildhylftkegkslaefirkaisvsdlyrdydfiedlakwaviekykegvvlmef
rysptfvsssygldvelihkafikgiknatellnnkihvalicisdkhsgdfaikhkhdf
vgfdhggreidlkdhkdvyhsvrdhglhltvhagedatlpnlntlytainilnverighg
irvsesdelielvkkkdillevcpisnlllnnvksmdthpirklydagvkvsvnsddpgm
flsnindnyeklyihlnftleefmimnnwafeksfvsddvkselkalyf

Timeline for d2amxb2:

• d2amxb2 first appeared in SCOP 1.73, called d2amxb1
  
• d2amxb2 was called d2amxb_ in SCOPe 2.05
  
• d2amxb2 appears in SCOPe 2.07
  
• d2amxb2 appears in the current release, SCOPe 2.08