Lineage for d2alyb5 (2aly B:682-785)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2555938Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2560487Superfamily d.58.13: Anticodon-binding domain of PheRS [54991] (1 family) (S)
    automatically mapped to Pfam PF03147
  5. 2560488Family d.58.13.1: Anticodon-binding domain of PheRS [54992] (1 protein)
  6. 2560489Protein Phenylalanyl-tRNA synthetase [54993] (1 species)
  7. 2560490Species Thermus thermophilus [TaxId:274] [54994] (12 PDB entries)
    identical sequence to Thermus aquaticus, TaxId: 271
  8. 2560494Domain d2alyb5: 2aly B:682-785 [126992]
    Other proteins in same PDB: d2alya_, d2alyb1, d2alyb2, d2alyb3, d2alyb4, d2alyb6
    automated match to d1jjcb4
    protein/RNA complex; complexed with mn, so4, ysa

Details for d2alyb5

PDB Entry: 2aly (more details), 2.6 Å

PDB Description: crystal structure of t.thermophilus phenylalanyl-trna synthetase complexed with 5'-o-[n-(l-tyrosyl)sulphamoyl]adenosine
PDB Compounds: (B:) phenylalanyl-tRNA synthetase beta chain

SCOPe Domain Sequences for d2alyb5:

Sequence; same for both SEQRES and ATOM records: (download)

>d2alyb5 d.58.13.1 (B:682-785) Phenylalanyl-tRNA synthetase {Thermus thermophilus [TaxId: 274]}
lafqdpsrhpaafrdlavvvpaptpygevealvreaagpyleslalfdlyqgpplpeghk
slafhlrfrhpkrtlrdeeveeavsrvaealrargfglrgldtp

SCOPe Domain Coordinates for d2alyb5:

Click to download the PDB-style file with coordinates for d2alyb5.
(The format of our PDB-style files is described here.)

Timeline for d2alyb5: