SCOPe 2.08: Domain d2alyb5: 2aly B:682-785

Lineage for d2alyb5 (2aly B:682-785)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.58: Ferredoxin-like [54861] (62 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.13: Anticodon-binding domain of PheRS [54991] (1 family)
   automatically mapped to Pfam PF03147

5. Family d.58.13.1: Anticodon-binding domain of PheRS [54992] (1 protein)

6. Protein Phenylalanyl-tRNA synthetase [54993] (1 species)

7. Species Thermus thermophilus [TaxId:274] [54994] (12 PDB entries)
   identical sequence to Thermus aquaticus, TaxId: 271

8. Domain d2alyb5: 2aly B:682-785 [126992]
   Other proteins in same PDB: d2alya_, d2alyb1, d2alyb2, d2alyb3, d2alyb4, d2alyb6
   automated match to d1jjcb4
   protein/RNA complex; complexed with mn, so4, ysa

Details for d2alyb5

PDB Entry: 2aly, 2.6 Å

PDB Description: crystal structure of t.thermophilus phenylalanyl-trna synthetase complexed with 5'-o-[n-(l-tyrosyl)sulphamoyl]adenosine

PDB Compounds: (B:) phenylalanyl-tRNA synthetase beta chain

SCOPe Domain Sequences for d2alyb5:

Sequence; same for both SEQRES and ATOM records:

>d2alyb5 d.58.13.1 (B:682-785) Phenylalanyl-tRNA synthetase {Thermus thermophilus [TaxId: 274]}
lafqdpsrhpaafrdlavvvpaptpygevealvreaagpyleslalfdlyqgpplpeghk
slafhlrfrhpkrtlrdeeveeavsrvaealrargfglrgldtp

Timeline for d2alyb5:

• d2alyb5 first appeared in SCOP 1.73
  
• d2alyb5 appears in SCOPe 2.07