SCOPe 2.08: Domain d2ahvd1: 2ahv D:284-529

Lineage for d2ahvd1 (2ahv D:284-529)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.124: NagB/RpiA/CoA transferase-like [100949] (1 superfamily)
   core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456

4. Superfamily c.124.1: NagB/RpiA/CoA transferase-like [100950] (9 families)

5. Family c.124.1.3: CoA transferase beta subunit-like [74657] (4 proteins)
   catalytic subunit: similar active site structure to the NagB and RpiA families; mixed beta-sheet of 7 strands, order 4321567; strand 3 is antiparallel to the rest

6. Protein Putative enzyme YdiF C-terminal domain [142194] (1 species)

7. Species Escherichia coli [TaxId:562] [142195] (3 PDB entries)
   Uniprot P37766 283-529

8. Domain d2ahvd1: 2ahv D:284-529 [126799]
   Other proteins in same PDB: d2ahva2, d2ahvb2, d2ahvc2, d2ahvd2
   automated match to d2ahua1
   complexed with coa

Details for d2ahvd1

PDB Entry: 2ahv, 2 Å

PDB Description: Crystal Structure of Acyl-CoA transferase from E. coli O157:H7 (YdiF)-thioester complex with CoA- 1

PDB Compounds: (D:) putative enzyme YdiF

SCOPe Domain Sequences for d2ahvd1:

Sequence, based on SEQRES records:

>d2ahvd1 c.124.1.3 (D:284-529) Putative enzyme YdiF C-terminal domain {Escherichia coli [TaxId: 562]}
plnqrklvarralfemrkgavgnvgvgiadgiglvareegcaddfiltvetgpiggitsq
giafganvntraildmtsqfdfyhgggldvcylsfaevdqhgnvgvhkfngkimgtggfi
disatskkiifcgtltagslkteiadgklnivqegrvkkfirelpeitfsgkialergld
vryiteravftlkedglhlieiapgvdlqkdildkmdftpvispelklmderlfidaamg
fvlpea

Sequence, based on observed residues (ATOM records):

>d2ahvd1 c.124.1.3 (D:284-529) Putative enzyme YdiF C-terminal domain {Escherichia coli [TaxId: 562]}
plnqrklvarralfemrkgavgnvgvgiadgiglvareegcaddfiltvetgpiggitan
vntraildmtsqfdfyhgggldvcylsfaevdqhgnvgvhkfngkimgtggfidisatsk
kiifcgtltagslkteiadgklnivqegrvkkfirelpeitfsgkialergldvryiter
avftlkedglhlieiapgvdlqkdildkmdftpvispelklmderlfidaamgfvlpea

Timeline for d2ahvd1:

• d2ahvd1 first appeared in SCOP 1.73
  
• d2ahvd1 appears in SCOPe 2.07