Lineage for d2agjl2 (2agj L:109-215)

  1. Root: SCOPe 2.02
  2. 1103260Class b: All beta proteins [48724] (174 folds)
  3. 1103261Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1103262Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1105902Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 1108335Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (4 species)
  7. 1108336Species Human (Homo sapiens) [TaxId:9606] [88569] (134 PDB entries)
    including humanized antibodies (chimeric proteins with human constant domains)
    SQ NA # humanized antibody ! Uniprot P01834 # KAC_HUMAN Ig kappa chain C region ! SQ P01834 # KAC_HUMAN Ig kappa chain C region. ! SQ NA # engineered antibody
  8. 1108474Domain d2agjl2: 2agj L:109-215 [126728]
    Other proteins in same PDB: d2agjh1, d2agjh2, d2agjl1
    automatically matched to d1rhha2

Details for d2agjl2

PDB Entry: 2agj (more details), 2.6 Å

PDB Description: crystal structure of a glycosylated fab from an igm cryoglobulin with properties of a natural proteolytic antibody
PDB Compounds: (L:) Yvo Fab, Light Chain

SCOPe Domain Sequences for d2agjl2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2agjl2 b.1.1.2 (L:109-215) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

SCOPe Domain Coordinates for d2agjl2:

Click to download the PDB-style file with coordinates for d2agjl2.
(The format of our PDB-style files is described here.)

Timeline for d2agjl2:

View in 3D
Domains from same chain:
(mouse over for more information)
d2agjl1