SCOP 1.73: Domain d2agjl2: 2agj L:109-215

Lineage for d2agjl2 (2agj L:109-215)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)

6. Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [88569] (125 PDB entries)
   including humanized antibodies (chimeric proteins with human constant domains)

8. Domain d2agjl2: 2agj L:109-215 [126728]
   Other proteins in same PDB: d2agjl1
   automatically matched to d1rhha2
   complexed with nag

Details for d2agjl2

PDB Entry: 2agj, 2.6 Å

PDB Description: crystal structure of a glycosylated fab from an igm cryoglobulin with properties of a natural proteolytic antibody

PDB Compounds: (L:) Yvo Fab, Light Chain

SCOP Domain Sequences for d2agjl2:

Sequence; same for both SEQRES and ATOM records:

>d2agjl2 b.1.1.2 (L:109-215) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

Timeline for d2agjl2:

• d2agjl2 is new in SCOP 1.73
  
• d2agjl2 appears in SCOP 1.75
  
• d2agjl2 appears in the current release, SCOPe 2.08