Lineage for d2afbb2 (2afb B:1-331)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2137471Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 2137472Superfamily c.72.1: Ribokinase-like [53613] (6 families) (S)
    has extra strand located between strands 2 and 3
  5. 2137473Family c.72.1.1: Ribokinase-like [53614] (10 protein domains)
    automatically mapped to Pfam PF00294
  6. 2137474Protein 2-keto-3-deoxygluconate kinase [75295] (2 species)
  7. 2137475Species Thermotoga maritima, TM0067 [TaxId:2336] [75296] (2 PDB entries)
  8. 2137477Domain d2afbb2: 2afb B:1-331 [126675]
    Other proteins in same PDB: d2afba3, d2afbb3
    automated match to d1j5va_
    complexed with ca, ni

Details for d2afbb2

PDB Entry: 2afb (more details), 2.05 Å

PDB Description: crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution
PDB Compounds: (B:) 2-keto-3-deoxygluconate kinase

SCOPe Domain Sequences for d2afbb2:

Sequence, based on SEQRES records: (download)

>d2afbb2 c.72.1.1 (B:1-331) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
mkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpnnpl
gdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakredfdw
ekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeeaqkv
mipfmeyvdvlianeediekvlgisvegldlktgklnreayakiaeevtrkynfktvgit
lresisatvnywsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsqkka
efaaaasclkhtipgdfvvlsieeieklasg

Sequence, based on observed residues (ATOM records): (download)

>d2afbb2 c.72.1.1 (B:1-331) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
mkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpnnpl
gdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakredfdw
ekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeeaqkv
mipfmeyvdvlianeediekvlgisvegldnreayakiaeevtrkynfktvgitlresis
atvnywsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsqkkaefaaaa
sclkhtipgdfvvlsieeieklasg

SCOPe Domain Coordinates for d2afbb2:

Click to download the PDB-style file with coordinates for d2afbb2.
(The format of our PDB-style files is described here.)

Timeline for d2afbb2:

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Domains from same chain:
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d2afbb3