Lineage for d2afba1 (2afb A:-2-330)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 707937Fold c.72: Ribokinase-like [53612] (3 superfamilies)
    core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
    potential superfamily: members of this fold have similar functions but different ATP-binding sites
  4. 707938Superfamily c.72.1: Ribokinase-like [53613] (5 families) (S)
    has extra strand located between strands 2 and 3
  5. 707939Family c.72.1.1: Ribokinase-like [53614] (9 proteins)
  6. 707940Protein 2-keto-3-deoxygluconate kinase [75295] (2 species)
  7. 707941Species Thermotoga maritima, TM0067 [TaxId:2336] [75296] (1 PDB entry)
  8. 707942Domain d2afba1: 2afb A:-2-330 [126674]
    automatically matched to d1j5va_
    complexed with ca, ni; mutant

Details for d2afba1

PDB Entry: 2afb (more details), 2.05 Å

PDB Description: crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution
PDB Compounds: (A:) 2-keto-3-deoxygluconate kinase

SCOP Domain Sequences for d2afba1:

Sequence, based on SEQRES records: (download)

>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
hhhmkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpn
nplgdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakred
fdwekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeea
qkvmipfmeyvdvlianeediekvlgisvegldlktgklnreayakiaeevtrkynfktv
gitlresisatvnywsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsq
kkaefaaaasclkhtipgdfvvlsieeieklas

Sequence, based on observed residues (ATOM records): (download)

>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
hhhmkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpn
nplgdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakred
fdwekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeea
qkvmipfmeyvdvlianeediekvlgisveglnreayakiaeevtrkynfktvgitlres
isatvnywsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsqkkaefaa
aasclkhtipgdfvvlsieeieklas

SCOP Domain Coordinates for d2afba1:

Click to download the PDB-style file with coordinates for d2afba1.
(The format of our PDB-style files is described here.)

Timeline for d2afba1: