SCOP 1.73: Domain d2afba1: 2afb A:-2-330

Lineage for d2afba1 (2afb A:-2-330)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (5 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.1: Ribokinase-like [53614] (9 proteins)

6. Protein 2-keto-3-deoxygluconate kinase [75295] (2 species)

7. Species Thermotoga maritima, TM0067 [TaxId:2336] [75296] (1 PDB entry)

8. Domain d2afba1: 2afb A:-2-330 [126674]
   automatically matched to d1j5va_
   complexed with ca, ni; mutant

Details for d2afba1

PDB Entry: 2afb, 2.05 Å

PDB Description: crystal structure of 2-dehydro-3- deoxygluconokinase (ec 2.7.1.45) (tm0067) from thermotoga maritima at 2.05 a resolution

PDB Compounds: (A:) 2-keto-3-deoxygluconate kinase

SCOP Domain Sequences for d2afba1:

Sequence, based on SEQRES records:

>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
hhhmkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpn
nplgdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakred
fdwekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeea
qkvmipfmeyvdvlianeediekvlgisvegldlktgklnreayakiaeevtrkynfktv
gitlresisatvnywsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsq
kkaefaaaasclkhtipgdfvvlsieeieklas

Sequence, based on observed residues (ATOM records):

>d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]}
hhhmkvvtfgeimlrlsppdhkrifqtdsfdvtyggaeanvaaflaqmgldayfvtklpn
nplgdaaaghlrkfgvktdyiarggnrigiyfleigasqrpskvvydrahsaiseakred
fdwekildgarwfhfsgitpplgkelpliledalkvanekgvtvscdlnyrarlwtkeea
qkvmipfmeyvdvlianeediekvlgisveglnreayakiaeevtrkynfktvgitlres
isatvnywsvmvfengqphfsnryeihivdrvgagdsfagaliygslmgfdsqkkaefaa
aasclkhtipgdfvvlsieeieklas

Timeline for d2afba1:

• d2afba1 is new in SCOP 1.73
  
• d2afba1 appears in SCOP 1.75
  
• d2afba1 appears in the current release, SCOPe 2.08, called d2afba2