SCOPe 2.06: Domain d2afad2: 2afa D:4-415

Lineage for d2afad2 (2afa D:4-415)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.1: Six-hairpin glycosidases [48208] (10 families)

5. Family a.102.1.3: N-acylglucosamine (NAG) epimerase [48222] (2 proteins)
   automatically mapped to Pfam PF07221

6. Protein Putative NAG isomerase YihS [140788] (2 species)

7. Species Salmonella typhimurium [TaxId:90371] [140789] (2 PDB entries)
   Uniprot Q8ZKT7 2-413

8. Domain d2afad2: 2afa D:4-415 [126671]
   Other proteins in same PDB: d2afaa2, d2afab3, d2afac3, d2afad3, d2afae3, d2afaf3
   automated match to d2afaa1

Details for d2afad2

PDB Entry: 2afa, 2.15 Å

PDB Description: crystal structure of putative nag isomerase from salmonella typhimurium

PDB Compounds: (D:) NAG isomerase

SCOPe Domain Sequences for d2afad2:

Sequence, based on SEQRES records:

>d2afad2 a.102.1.3 (D:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}
kwfntlshnrwleqetdrifnfgknavvptgfgwlgnkgqikeemgthlwitarmlhvys
vaasmgrpgaydlvdhgikamngalrdkkyggwyacvndqgvvdaskqgyqhffallgaa
savttghpearklldytieviekyfwseeeqmcleswdeafsqtedyrggnanmhaveaf
livydvthdkkwldralriasviihdvarngdyrvnehfdsqwnpirdynkdnpahrfra
yggtpghwiewgrlmlhlhaalearfetppawlledakglfhatirdawapdgadgfvys
vdwdgkpivrervrwpiveamgtayalytltddsqyeewyqkwwdycikylmdyengsww
qeldadnkvttkvwdgkqdiyhllhclviprlplapglapavaaglldina

Sequence, based on observed residues (ATOM records):

>d2afad2 a.102.1.3 (D:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]}
kwfntlshnrwleqetdrifnfgknavvptgfgwlgnkgqikeemgthlwitarmlhvys
vaasmgrpgaydlvdhgikamngalrdkkyggwyacvndqgvvdaskqgyqhffallgaa
savttghpearklldytieviekyfwseeeqmcleswdeafsqtedyrggnanmhaveaf
livydvthdkkwldralriasviihdvarngdyrvnehfdsqwnpirdynkdnpahrfra
yggtpghwiewgrlmlhlhaalearfetppawlledakglfhatirdawapdgadgfvys
vdwdgkpivrervrwpiveamgtayalytltddsqyeewyqkwwdycikylmdyengsww
qeldadnkvttgkqdiyhllhclviprlplapglapavaaglldina

Timeline for d2afad2:

• d2afad2 first appeared in SCOP 1.73, called d2afad1
  
• d2afad2 was called d2afad_ in SCOPe 2.05
  
• d2afad2 appears in SCOPe 2.07
  
• d2afad2 appears in the current release, SCOPe 2.08