SCOPe 2.08: Domain d2abra1: 2abr A:6-417

Lineage for d2abra1 (2abr A:6-417)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (8 families)

5. Family d.126.1.4: Arginine deiminase [103232] (1 protein)
   functionally related to the amidinotransferase, similar active sites

6. Protein Arginine deiminase [103233] (2 species)

7. Species Pseudomonas aeruginosa [TaxId:287] [103234] (5 PDB entries)

8. Domain d2abra1: 2abr A:6-417 [126530]

Details for d2abra1

PDB Entry: 2abr, 2.9 Å

PDB Description: structure of d280a arginine deiminase with l-arginine forming a s- alkylthiouronium reaction intermediate

PDB Compounds: (A:) Arginine deiminase

SCOPe Domain Sequences for d2abra1:

Sequence, based on SEQRES records:

>d2abra1 d.126.1.4 (A:6-417) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]}
tklgvhseagklrkvmvcspglahqrltpsncdellfddviwvnqakrdhfdfvtkmrer
gidvlemhnlltetiqnpealkwildrkitadsvglgltselrswlesleprklaeylig
gvaaddlpaseganilkmyreylghssfllpplpntqftrdttcwiyggvtlnpmywpar
rqetllttaiykfhpefanaefeiwygdpdkdhgsstleggdvmpigngvvligmgerss
rqaigqvaqslfakgaaervivaglpksraamhlatvfsfcdrdlvtvfpevvkeivpfs
lrpdpsspygmnirreektflevvaeslglkklrvvetggnsfaaereqwddgnnvvcle
pgvvvgydrntytntllrkagvevitisaselgrgrggghcmtcpivrdpid

Sequence, based on observed residues (ATOM records):

>d2abra1 d.126.1.4 (A:6-417) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]}
tklgvhseagklrkvmvcspglahqrltpsncdellfddviwvnqakrdhfdfvtkmrer
gidvlemhnlltetiqnpealkwildrkitadsvglgltselrswlesleprklaeylig
gvaaddlpaseganilkmyreylghssfllpplpntqftrdttcwiyggvtlnpmywpar
rqetllttaiykfhpefanaefeiwygdpdkdhgsstleggdvmpigngvvligmgerss
rqaigqvaqslfakgaaervivaglpksmhlatvfsfcdrdlvtvfpevvkeivpfslrp
dpsspygmnirreektflevvaeslglkklrvvetgreqwddgnnvvclepgvvvgydrn
tytntllrkagvevitisaselgrgrggghcmtcpivrdpid

Timeline for d2abra1:

• d2abra1 first appeared in SCOP 1.73
  
• d2abra1 appears in SCOPe 2.07