SCOP 1.75: Domain d2aafb1: 2aaf B:6-417

Lineage for d2aafb1 (2aaf B:6-417)

1. Root: SCOP 1.75

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (7 families)

5. Family d.126.1.4: Arginine deiminase [103232] (1 protein)
   functionally related to the amidinotransferase, similar active sites

6. Protein Arginine deiminase [103233] (2 species)

7. Species Pseudomonas aeruginosa [TaxId:287] [103234] (5 PDB entries)

8. Domain d2aafb1: 2aaf B:6-417 [126472]
   automatically matched to 2AAF A:6-417
   complexed with cyr; mutant

Details for d2aafb1

PDB Entry: 2aaf, 2.3 Å

PDB Description: structure of h278a arginine deiminase with l-arginine forming a s- alkylthiouronium reaction intermediate

PDB Compounds: (B:) Arginine deiminase

SCOP Domain Sequences for d2aafb1:

Sequence, based on SEQRES records:

>d2aafb1 d.126.1.4 (B:6-417) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]}
tklgvhseagklrkvmvcspglahqrltpsncdellfddviwvnqakrdhfdfvtkmrer
gidvlemhnlltetiqnpealkwildrkitadsvglgltselrswlesleprklaeylig
gvaaddlpaseganilkmyreylghssfllpplpntqftrdttcwiyggvtlnpmywpar
rqetllttaiykfhpefanaefeiwygdpdkdhgsstleggdvmpigngvvligmgerss
rqaigqvaqslfakgaaervivaglpksraamaldtvfsfcdrdlvtvfpevvkeivpfs
lrpdpsspygmnirreektflevvaeslglkklrvvetggnsfaaereqwddgnnvvcle
pgvvvgydrntytntllrkagvevitisaselgrgrggghcmtcpivrdpid

Sequence, based on observed residues (ATOM records):

>d2aafb1 d.126.1.4 (B:6-417) Arginine deiminase {Pseudomonas aeruginosa [TaxId: 287]}
tklgvhseagklrkvmvcspglahqrltpsncdellfddviwvnqakrdhfdfvtkmrer
gidvlemhnlltetiqnpealkwildrkitadsvglgltselrswlesleprklaeylig
gvaaddlpaseganilkmyreylghssfllpplpntqftrdttcwiyggvtlnpmywpar
rqetllttaiykfhpefanaefeiwygdpdkdhgsstleggdvmpigngvvligmgerss
rqaigqvaqslfakgaaervivaglpksraamaldtvfsfcdrdlvtvfpevvkeivpfs
lrpdpsspygmnirreektflevvaeslglkklrvvetgaaereqwddgnnvvclepgvv
vgydrntytntllrkagvevitisaselgrgrggghcmtcpivrdpid

Timeline for d2aafb1:

• d2aafb1 first appeared in SCOP 1.73
  
• d2aafb1 is called d2aafb_ in SCOPe 2.01
  
• d2aafb1 appears in the current release, SCOPe 2.08, called d2aafb_