Lineage for d2a6qb1 (2a6q B:10-64)

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 882321Fold d.306: YefM-like [143119] (1 superfamily)
    core: beta-alpha(2)-beta(2)-alpha; mixed beta-sheet, order:123, strands 1 and 2 are parallel; forms compact dimer with a single beta-sheet;
  4. 882322Superfamily d.306.1: YefM-like [143120] (1 family) (S)
  5. 882323Family d.306.1.1: YefM-like [143121] (2 proteins)
    antitoxin component of the YefM/YoeB-like system; binds to the toxin component wia extra C-terminal tail, unstructured in the free state, but adopting a RelB-like conformation in the bound state
  6. 882324Protein Antitoxin YefM [143122] (1 species)
  7. 882325Species Escherichia coli [TaxId:562] [143123] (1 PDB entry)
    Uniprot P69346 1-55! Uniprot P69346 1-83
  8. 882327Domain d2a6qb1: 2a6q B:10-64 [126294]
    Other proteins in same PDB: d2a6qe1, d2a6qf1

Details for d2a6qb1

PDB Entry: 2a6q (more details), 2.05 Å

PDB Description: crystal structure of yefm-yoeb complex
PDB Compounds: (B:) Antitoxin yefM

SCOP Domain Sequences for d2a6qb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2a6qb1 d.306.1.1 (B:10-64) Antitoxin YefM {Escherichia coli [TaxId: 562]}

SCOP Domain Coordinates for d2a6qb1:

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Timeline for d2a6qb1: