Lineage for d2a6ho1 (2a6h O:2-96)

  1. Root: SCOP 1.75
  2. 758332Class a: All alpha proteins [46456] (284 folds)
  3. 778858Fold a.143: RPB6/omega subunit-like [63561] (1 superfamily)
    core: 2 helices and adjacent loops
  4. 778859Superfamily a.143.1: RPB6/omega subunit-like [63562] (2 families) (S)
    the bacterial omega and eukaryotic RPB6 subunits both function in polymerase assembly; the common core is involved in conserved interactions with other subunits
  5. 778860Family a.143.1.1: RNA polymerase omega subunit [63563] (1 protein)
    4 helices; irregular array
  6. 778861Protein RNA polymerase omega subunit [63564] (3 species)
  7. 778869Species Thermus thermophilus [TaxId:274] [74729] (9 PDB entries)
    Uniprot Q8RQE7; part of multichain biological unit
  8. 778873Domain d2a6ho1: 2a6h O:2-96 [126276]
    Other proteins in same PDB: d2a6ha1, d2a6ha2, d2a6hb1, d2a6hb2, d2a6hc1, d2a6hd1, d2a6hf1, d2a6hf2, d2a6hf3, d2a6hk1, d2a6hk2, d2a6hl1, d2a6hl2, d2a6hm1, d2a6hn1, d2a6hp1, d2a6hp2, d2a6hp3
    automatically matched to d1iw7e_
    complexed with mg, std, zn

Details for d2a6ho1

PDB Entry: 2a6h (more details), 2.4 Å

PDB Description: Crystal structure of the T. thermophilus RNA polymerase holoenzyme in complex with antibiotic sterptolydigin
PDB Compounds: (O:) RNA polymerase omega chain

SCOP Domain Sequences for d2a6ho1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2a6ho1 a.143.1.1 (O:2-96) RNA polymerase omega subunit {Thermus thermophilus [TaxId: 274]}
aepgidklfgmvdskyrltvvvakraqqllrhgfkntvlepeerpkmqtleglfddpnae
twamkelltgrlvfgenlvpedrlqkemeriypge

SCOP Domain Coordinates for d2a6ho1:

Click to download the PDB-style file with coordinates for d2a6ho1.
(The format of our PDB-style files is described here.)

Timeline for d2a6ho1: