Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds) |
Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily) Multidomain subunits of complex domain organization |
Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (3 families) The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit |
Family e.29.1.2: RNA-polymerase beta-prime [64490] (4 proteins) |
Protein RNA-polymerase beta-prime [64493] (2 species) |
Species Thermus thermophilus [TaxId:274] [75610] (15 PDB entries) Uniprot Q8RQE8; part of multichain biological unit |
Domain d2a6hd_: 2a6h D: [126265] Other proteins in same PDB: d2a6ha1, d2a6ha2, d2a6hb1, d2a6hb2, d2a6hc_, d2a6he_, d2a6hf1, d2a6hf2, d2a6hf3, d2a6hk1, d2a6hk2, d2a6hl1, d2a6hl2, d2a6hm_, d2a6ho_, d2a6hp1, d2a6hp2, d2a6hp3 automated match to d1smyd_ protein/RNA complex; complexed with mg, std, zn |
PDB Entry: 2a6h (more details), 2.4 Å
SCOPe Domain Sequences for d2a6hd_:
Sequence, based on SEQRES records: (download)
>d2a6hd_ e.29.1.2 (D:) RNA-polymerase beta-prime {Thermus thermophilus [TaxId: 274]} kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacg kykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsat eleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkd geevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgei laelpepylfraeeegvvelkeleegaflvlrredepvatyflpvgmtplvvhgeivekg qplaeakgllrmprqvraaqveaeeegetvyltlflewtepkdyrvqphmnvvvpegarv eagdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgdrvapgdvl adggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldlealekelleem khpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdggrfatsdln dlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtnpgsdrplr sltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelfkpfllkkm eekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgiqafqpvlv egqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspasgeplakp srdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagretsvgrlky vfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavedekvaweliq ldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigiddavipeekk qyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfeenypfnply vmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfisshgarkgg adtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslrlrkradie aglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrspltcqtrygvc qkcygydlsmarpvsigeavgivaaqsigepgtqltmrtfhtggvagaaditqglprvie lfearrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyvea gqpltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvev tdpgdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfq ntthvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearke avea
>d2a6hd_ e.29.1.2 (D:) RNA-polymerase beta-prime {Thermus thermophilus [TaxId: 274]} kkevrkvrialaspekirswsygevekpetinyrtlkperdglfderifgpikdyecacg kykrqrfegkvcercgvevtksivrryrmghielatpaahiwfvkdvpskigtlldlsat eleqvlyfskyivldpkgailngvpvekrqlltdeeyrelrygkqetyplppgvdalvkd geevvkgqelapgvvsrldgvalyrfprrvrveyvkkeraglrlplaawvekeaykpgei laelpepylfgdkivaaidpeeeviaeaegvvhlhepasilvvkarvypfeddvevstgd rvapgdvladggkvksdvygrvevdlvrnvvrvvesydidarmgaeaiqqllkeldleal ekelleemkhpsrarrakarkrlevvrafldsgnrpewmileavpvlppdlrpmvqvdgg rfatsdlndlyrrlinrnnrlkkllaqgapeiiirnekrmlqeavdalldngrrgapvtn pgsdrplrsltdilsgkqgrfrqnllgkrvdysgrsvivvgpqlklhqcglpkrmalelf kpfllkkmeekgiapnvkaarrmlerqrdikdevwdaleevihgkvvllnraptlhrlgi qafqpvlvegqsiqlhplvceafnadfdgdqmavhvplssfaqaeariqmlsahnllspa sgeplakpsrdiilglyyitqvrkekkgaglefatpeealaahergevalnapikvagre tsvgrlkyvfanpdeallavahgivdlqdvvtvrymgkrletspgrilfarivaeavede kvaweliqldvpqeknslkdlvyqaflrlgmektarlldalkyygftfsttsgitigidd avipeekkqyleeadrkllqieqayemgfltdrerydqilqlwtettekvtqavfknfee nypfnplyvmaqsgargnpqqirqlcglrglmqkpsgetfevpvrssfregltvleyfis shgarkggadtalrtadsgyltrklvdvtheivvreadcgttnyisvplfqpdevtrslr lrkradieaglygrvlarevevlgvrleegrylsmddvhllikaaeageiqevpvrsplt cqtrygvcqkcygydlsmarpvsigeavgivaaqsigepgtqltmrditqglprvielfe arrpkakaviseidgvvrieeteeklsvfvesegfskeyklpkearllvkdgdyveagqp ltrgaidphqlleakgpeaverylveeiqkvyraqgvklhdkhieivvrqmmkyvevtdp gdsrllegqvlekwdvealnerliaegktpvawkpllmgvtksalstkswlsaasfqntt hvlteaaiagkkdeliglkenvilgrlipagtgsdfvrftqvvdqktlkaieearkeave a
Timeline for d2a6hd_: