Lineage for d2a5sa1 (2a5s A:7-142,A:145-285)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2913607Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2913608Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2913609Family c.94.1.1: Phosphate binding protein-like [53851] (45 proteins)
    has additional insertions and/or extensions that are not grouped together
  6. 2914403Protein N-methyl-D-aspartate receptor subunit 1 [89787] (3 species)
  7. 2914452Species Norway rat (Rattus norvegicus), subtype 2A [TaxId:10116] [142803] (1 PDB entry)
    Uniprot Q00959 404-539,661-801
  8. 2914453Domain d2a5sa1: 2a5s A:7-142,A:145-285 [126178]
    complexed with glu

Details for d2a5sa1

PDB Entry: 2a5s (more details), 1.7 Å

PDB Description: crystal structure of the nr2a ligand binding core in complex with glutamate
PDB Compounds: (A:) N-methyl-D-aspartate receptor NMDAR2A subunit

SCOPe Domain Sequences for d2a5sa1:

Sequence, based on SEQRES records: (download)

>d2a5sa1 c.94.1.1 (A:7-142,A:145-285) N-methyl-D-aspartate receptor subunit 1 {Norway rat (Rattus norvegicus), subtype 2A [TaxId: 10116]}

Sequence, based on observed residues (ATOM records): (download)

>d2a5sa1 c.94.1.1 (A:7-142,A:145-285) N-methyl-D-aspartate receptor subunit 1 {Norway rat (Rattus norvegicus), subtype 2A [TaxId: 10116]}

SCOPe Domain Coordinates for d2a5sa1:

Click to download the PDB-style file with coordinates for d2a5sa1.
(The format of our PDB-style files is described here.)

Timeline for d2a5sa1: