Lineage for d1zyre1 (1zyr E:2-96)

  1. Root: SCOP 1.75
  2. 758332Class a: All alpha proteins [46456] (284 folds)
  3. 778858Fold a.143: RPB6/omega subunit-like [63561] (1 superfamily)
    core: 2 helices and adjacent loops
  4. 778859Superfamily a.143.1: RPB6/omega subunit-like [63562] (2 families) (S)
    the bacterial omega and eukaryotic RPB6 subunits both function in polymerase assembly; the common core is involved in conserved interactions with other subunits
  5. 778860Family a.143.1.1: RNA polymerase omega subunit [63563] (1 protein)
    4 helices; irregular array
  6. 778861Protein RNA polymerase omega subunit [63564] (3 species)
  7. 778869Species Thermus thermophilus [TaxId:274] [74729] (9 PDB entries)
    Uniprot Q8RQE7; part of multichain biological unit
  8. 778884Domain d1zyre1: 1zyr E:2-96 [125855]
    Other proteins in same PDB: d1zyra1, d1zyra2, d1zyrb1, d1zyrb2, d1zyrc1, d1zyrd1, d1zyrf1, d1zyrf2, d1zyrf3, d1zyrk1, d1zyrk2, d1zyrl1, d1zyrl2, d1zyrm1, d1zyrn1, d1zyrp1, d1zyrp2, d1zyrp3
    automatically matched to d1iw7e_
    complexed with mg, std, zn

Details for d1zyre1

PDB Entry: 1zyr (more details), 3 Å

PDB Description: Structure of Thermus thermophilus RNA polymerase holoenzyme in complex with the antibiotic streptolydigin
PDB Compounds: (E:) DNA-directed RNA polymerase omega chain

SCOP Domain Sequences for d1zyre1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zyre1 a.143.1.1 (E:2-96) RNA polymerase omega subunit {Thermus thermophilus [TaxId: 274]}
aepgidklfgmvdskyrltvvvakraqqllrhgfkntvlepeerpkmqtleglfddpnae
twamkelltgrlvfgenlvpedrlqkemeriypge

SCOP Domain Coordinates for d1zyre1:

Click to download the PDB-style file with coordinates for d1zyre1.
(The format of our PDB-style files is described here.)

Timeline for d1zyre1: