SCOPe 2.05: Domain d1zy9a2: 1zy9 A:178-525

Lineage for d1zy9a2 (1zy9 A:178-525)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.13: YicI catalytic domain-like [117372] (2 proteins)

6. Protein Alpha-galactosidase GalA catalytic domain [141794] (1 species)
   includes extra C-terminal all-beta subdomain, 4-stranded meander beta-sheet

7. Species Thermotoga maritima [TaxId:2336] [141795] (1 PDB entry)
   Uniprot O33835 178-525

8. Domain d1zy9a2: 1zy9 A:178-525 [125814]
   Other proteins in same PDB: d1zy9a1
   complexed with edo, gol

Details for d1zy9a2

PDB Entry: 1zy9, 2.34 Å

PDB Description: Crystal structure of Alpha-galactosidase (EC 3.2.1.22) (Melibiase) (tm1192) from Thermotoga maritima at 2.34 A resolution

PDB Compounds: (A:) alpha-galactosidase

SCOPe Domain Sequences for d1zy9a2:

Sequence; same for both SEQRES and ATOM records:

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}
rvpkhtptgwcswyhyfldltweetlknlklaknfpfevfqiddayekdigdwlvtrgdf
psveemakviaengfipgiwtapfsvsetsdvfnehpdwvvkengepkmayrnwnkkiya
ldlskdevlnwlfdlfsslrkmgyryfkidflfagavpgerkknitpiqafrkgietirk
avgedsfilgcgspllpavgcvdgmrigpdtapfwgehiedngapaarwalrnaitryfm
hdrfwlndpdclilreektdltqkekelysytcgvldnmiiesddlslvrdhgkkvlket
lellggrprvqnimsedlryeivssgtlsgnvkivvdlnsreyhleke

Timeline for d1zy9a2:

• d1zy9a2 first appeared in SCOP 1.73
  
• d1zy9a2 appears in SCOPe 2.04
  
• d1zy9a2 appears in SCOPe 2.06
  
• d1zy9a2 appears in the current release, SCOPe 2.08