Lineage for d1zy9a2 (1zy9 A:178-525)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 682152Superfamily c.1.8: (Trans)glycosidases [51445] (14 families) (S)
  5. 683562Family c.1.8.13: YicI catalytic domain-like [117372] (2 proteins)
  6. 683563Protein Alpha-galactosidase GalA catalytic domain [141794] (1 species)
    includes extra C-terminal all-beta subdomain, 4-stranded meander beta-sheet
  7. 683564Species Thermotoga maritima [TaxId:2336] [141795] (1 PDB entry)
  8. 683565Domain d1zy9a2: 1zy9 A:178-525 [125814]
    Other proteins in same PDB: d1zy9a1
    complexed with edo, gol

Details for d1zy9a2

PDB Entry: 1zy9 (more details), 2.34 Å

PDB Description: Crystal structure of Alpha-galactosidase (EC 3.2.1.22) (Melibiase) (tm1192) from Thermotoga maritima at 2.34 A resolution
PDB Compounds: (A:) alpha-galactosidase

SCOP Domain Sequences for d1zy9a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}
rvpkhtptgwcswyhyfldltweetlknlklaknfpfevfqiddayekdigdwlvtrgdf
psveemakviaengfipgiwtapfsvsetsdvfnehpdwvvkengepkmayrnwnkkiya
ldlskdevlnwlfdlfsslrkmgyryfkidflfagavpgerkknitpiqafrkgietirk
avgedsfilgcgspllpavgcvdgmrigpdtapfwgehiedngapaarwalrnaitryfm
hdrfwlndpdclilreektdltqkekelysytcgvldnmiiesddlslvrdhgkkvlket
lellggrprvqnimsedlryeivssgtlsgnvkivvdlnsreyhleke

SCOP Domain Coordinates for d1zy9a2:

Click to download the PDB-style file with coordinates for d1zy9a2.
(The format of our PDB-style files is described here.)

Timeline for d1zy9a2:

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Domains from same chain:
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d1zy9a1