SCOPe 2.08: Domain d1zv8.2: 1zv8 C:2-47,D:5-33

Lineage for d1zv8.2 (1zv8 C:2-47,D:5-33)

1. Root: SCOPe 2.08

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.3: Coronavirus S2 glycoprotein [111474] (2 families)

5. Family h.3.3.1: Coronavirus spike glycoprotein S2 fragments [111475] (1 protein)

6. Protein E2 spike glycoprotein [111476] (2 species)

7. Species Human coronavirus (strain SARS) [TaxId:227859] [111478] (9 PDB entries)
   Uniprot P59594 896-972,1142-1183
   Uniprot Q6UZF0 914-949,1148-1193

8. Domain d1zv8.2: 1zv8 C:2-47,D:5-33 [125695]
   complexed with act, cac, na, zn

Details for d1zv8.2

PDB Entry: 1zv8, 1.94 Å

PDB Description: A structure-based mechanism of SARS virus membrane fusion

PDB Compounds: (C:) e2 glycoprotein, (D:) e2 glycoprotein

SCOPe Domain Sequences for d1zv8.2:

Sequence; same for both SEQRES and ATOM records:

>g1zv8.2 h.3.3.1 (C:2-47,D:5-33) E2 spike glycoprotein {Human coronavirus (strain SARS) [TaxId: 227859]}
qkqianqfnkaisqiqesltttstalgklqdvvnqnaqalntlvkqXinasvvniqkeid
rlnevaknlneslidl

Timeline for d1zv8.2:

• d1zv8.2 first appeared in SCOP 1.73
  
• d1zv8.2 appears in SCOPe 2.07