SCOPe 2.08: Domain d1zv8.1: 1zv8 A:1-49,B:5-31

Lineage for d1zv8.1 (1zv8 A:1-49,B:5-31)

1. Root: SCOPe 2.08

2. Class h: Coiled coil proteins [57942] (7 folds)

3. Fold h.3: Stalk segment of viral fusion proteins [58063] (3 superfamilies)
   core: trimeric coiled coil

4. Superfamily h.3.3: Coronavirus S2 glycoprotein [111474] (2 families)

5. Family h.3.3.1: Coronavirus spike glycoprotein S2 fragments [111475] (1 protein)

6. Protein E2 spike glycoprotein [111476] (2 species)

7. Species Human coronavirus (strain SARS) [TaxId:227859] [111478] (9 PDB entries)
   Uniprot P59594 896-972,1142-1183
   Uniprot Q6UZF0 914-949,1148-1193

8. Domain d1zv8.1: 1zv8 A:1-49,B:5-31 [125694]
   complexed with act, cac, na, zn

Details for d1zv8.1

PDB Entry: 1zv8, 1.94 Å

PDB Description: A structure-based mechanism of SARS virus membrane fusion

PDB Compounds: (A:) e2 glycoprotein, (B:) e2 glycoprotein

SCOPe Domain Sequences for d1zv8.1:

Sequence; same for both SEQRES and ATOM records:

>g1zv8.1 h.3.3.1 (A:1-49,B:5-31) E2 spike glycoprotein {Human coronavirus (strain SARS) [TaxId: 227859]}
nqkqianqfnkaisqiqesltttstalgklqdvvnqnaqalntlvkqlsXinasvvniqk
eidrlnevaknlnesli

Timeline for d1zv8.1:

• d1zv8.1 first appeared in SCOP 1.73
  
• d1zv8.1 appears in SCOPe 2.07