SCOPe 2.07: Domain d1zrob1: 1zro B:8-282

Lineage for d1zrob1 (1zro B:8-282)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.264: Duffy binding domain-like [140923] (1 superfamily)
   consist of two subdomains, each containing a three-helical bundle

4. Superfamily a.264.1: Duffy binding domain-like [140924] (2 families)
   automatically mapped to Pfam PF05424

5. Family a.264.1.1: Duffy binding domain [140925] (3 proteins)
   Pfam PF05424

6. Protein Erythrocyte binding antigen region II [140928] (1 species)
   duplication; tandem repeat of two Duffy-binding domain

7. Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [140929] (2 PDB entries)
   Uniprot Q25735 283-596! Uniprot Q25735 8-282

8. Domain d1zrob1: 1zro B:8-282 [125553]
   automated match to d1zrla1
   complexed with cl, so4

Details for d1zrob1

PDB Entry: 1zro, 2.25 Å

PDB Description: crystal structure of eba-175 region ii (rii) crystallized in the presence of (alpha)2,3-sialyllactose

PDB Compounds: (B:) erythrocyte binding antigen region II

SCOPe Domain Sequences for d1zrob1:

Sequence, based on SEQRES records:

>d1zrob1 a.264.1.1 (B:8-282) Erythrocyte binding antigen region II {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
nevlsncrekrkgmkwdckkkndrsnyvcipdrriqlcivnlaiiktytketmkdhfiea
skkesqlllkkndnkynskfcndlknsfldyghlamgndmdfggystkaenkiqevfkga
hgeisehkiknfrkkwwnefreklweamlsehknninncknipqeelqitqwikewhgef
llerdnraklpkskcknnalyeacekecidpcmkyrdwiirskfewhtlskeyetqkvpk
enaenylikisenkndakvslllnncdaeyskycd

Sequence, based on observed residues (ATOM records):

>d1zrob1 a.264.1.1 (B:8-282) Erythrocyte binding antigen region II {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
nevlsncrekrkgmkwdckkkndrsnyvcipdrriqlcivnlaiiktytketmkdhfiea
skkesqlllkkndnkynskfcndlknsfldyghlamgndmdfggystkaenkiqevfkga
hgeisehkiknfrkkwwnefreklweamlsehknnicknipqeelqitqwikewhgefll
erdnraklpkskcknnalyeacekecidpcmkyrdwiirskfewhtlskeyetqkvpken
aenylikisenkndakvslllnncdaeyskycd

Timeline for d1zrob1:

• d1zrob1 first appeared in SCOP 1.73
  
• d1zrob1 appears in SCOPe 2.06
  
• d1zrob1 appears in the current release, SCOPe 2.08