SCOPe 2.03: Domain d1znnf_: 1znn F:

Lineage for d1znnf_ (1znn F:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.6: PdxS-like [141755] (2 proteins)
   Pfam PF01680; SOR/SNZ

6. Protein Pyridoxal biosynthesis lyase PdxS [141756] (1 species)
   PLP synthase

7. Species Bacillus stearothermophilus [TaxId:1422] [141757] (1 PDB entry)
   Uniprot Q5L3Y2 18-271

8. Domain d1znnf_: 1znn F: [125391]
   automated match to d1znna1
   complexed with mrd, so4

Details for d1znnf_

PDB Entry: 1znn, 2.2 Å

PDB Description: Structure of the synthase subunit of PLP synthase

PDB Compounds: (F:) plp synthase

SCOPe Domain Sequences for d1znnf_:

Sequence, based on SEQRES records:

>d1znnf_ c.1.2.6 (F:) Pyridoxal biosynthesis lyase PdxS {Bacillus stearothermophilus [TaxId: 1422]}
kggvimdvvnaeqakiaeaagavavmalervpadiraaggvarmadptvieevmnavsip
vmakvrighyvearvlealgvdyidesevltpadeefhidkrqftvpfvcgcrdlgeaar
riaegasmlrtkgepgtgniveavrhmrkvnaqirkvvnmsedelvaeakqlgapvevlr
eikrlgrlpvvnfaaggvttpadaalmmhlgadgvfvgsgifksenpekyaraiveatth
yedyeliahlskgl

Sequence, based on observed residues (ATOM records):

>d1znnf_ c.1.2.6 (F:) Pyridoxal biosynthesis lyase PdxS {Bacillus stearothermophilus [TaxId: 1422]}
kggvimdvvnaeqakiaeaagavavmaleggvarmadptvieevmnavsipvmakvrigh
yvearvlealgvdyidesevltpadeefhidkrqftvpfvcgcrdlgeaarriaegasml
rtkgepgtgniveavrhmrkvnaqirkvvnmsedelvaeakqlgapvevlreikrlgrlp
vvnfaaggvttpadaalmmhlgadgvfvgsgifksenpekyaraiveatthyedyeliah
lskgl

Timeline for d1znnf_:

• d1znnf_ first appeared in SCOP 1.73, called d1znnf1
  
• d1znnf_ was called d1znnf1 in SCOPe 2.02
  
• d1znnf_ appears in SCOPe 2.04
  
• d1znnf_ appears in the current release, SCOPe 2.08