SCOPe 2.08: Domain d1zkdb_: 1zkd B:

Lineage for d1zkdb_ (1zkd B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families)

5. Family c.66.1.52: RPA4359-like [142644] (1 protein)
   Pfam PF02636; DUF185

6. Protein Hypothetical protein RPA4359 [142645] (1 species)

7. Species Rhodopseudomonas palustris [TaxId:1076] [142646] (1 PDB entry)
   Uniprot Q6N1P6 2-366

8. Domain d1zkdb_: 1zkd B: [125185]
   automated match to d1zkda1

Details for d1zkdb_

PDB Entry: 1zkd, 2.1 Å

PDB Description: X-Ray structure of the putative protein Q6N1P6 from Rhodopseudomonas palustris at the resolution 2.1 A , Northeast Structural Genomics Consortium target RpR58

PDB Compounds: (B:) duf185

SCOPe Domain Sequences for d1zkdb_:

Sequence, based on SEQRES records:

>d1zkdb_ c.66.1.52 (B:) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
idqtalateikrlikaagpmpvwrymelclghpehgyyvtrdplgregdfttspeisqmf
gellglwsasvwkaadepqtlrlieigpgrgtmmadalralrvlpilyqslsvhlveinp
vlrqkqqtllagirnihwhdsfedvpegpavilaneyfdvlpihqaikretgwherviei
gasgelvfgvaadpipgfeallpplarlsppgavfewrpdteilkiasrvrdqggaalii
dyghlrsdvgdtfqaiashsyadplqhpgradltahvdfdalgraaesigarahgpvtqg
aflkrlgietralslmakatpqvsediagalqrltgegrgamgsmfkvigvsdpkietlv
alsdd

Sequence, based on observed residues (ATOM records):

>d1zkdb_ c.66.1.52 (B:) Hypothetical protein RPA4359 {Rhodopseudomonas palustris [TaxId: 1076]}
idqtalateikrlikaagpmpvwrymelclghpehgyyvtfttspeisqmfgellglwsa
svwkaadepqtlrlieigpgrgtmmadalralrvlpilyqslsvhlveinpvlrqkqqtl
lagirnihwhdsfedvpegpavilaneyfdvlpihqaikretgwhervieigasgelvfg
vaadpipgfeallpplarlsppgavfewrpdteilkiasrvrdqggaaliidyghlrsdv
gdtfqaiashsyadplqhpgradltahvdfdalgraaesigarahgpvtqgaflkrlgie
tralslmakatpqvsediagalqrltgegrgamgsmfkvigvsdpkietlvalsdd

Timeline for d1zkdb_:

• d1zkdb_ first appeared in SCOP 1.73, called d1zkdb1
  
• d1zkdb_ appears in SCOPe 2.07