Lineage for d1zjma3 (1zjm A:149-335)

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 740075Fold d.218: Nucleotidyltransferase [81302] (1 superfamily)
    core: alpha-beta-turn-beta-X-beta-(alpha); mixed beta-sheet, order of core strands: 123
  4. 740076Superfamily d.218.1: Nucleotidyltransferase [81301] (11 families) (S)
  5. 740084Family d.218.1.2: DNA polymerase beta-like [81300] (4 proteins)
    insert X in the core is an alpha-beta(2) unit; mixed 5-stranded sheet, order: 12543; contains extra C-terminal alpha+beta subdomain
  6. 740085Protein DNA polymerase beta, catalytic (31 kD) fragment [81578] (2 species)
  7. 740086Species Human (Homo sapiens) [TaxId:9606] [81574] (103 PDB entries)
  8. 740094Domain d1zjma3: 1zjm A:149-335 [125155]
    Other proteins in same PDB: d1zjma1, d1zjma2
    automatically matched to d1bpxa4
    complexed with na

Details for d1zjma3

PDB Entry: 1zjm (more details), 2.1 Å

PDB Description: Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminus
PDB Compounds: (A:) DNA polymerase beta

SCOP Domain Sequences for d1zjma3:

Sequence, based on SEQRES records: (download)

>d1zjma3 d.218.1.2 (A:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Human (Homo sapiens) [TaxId: 9606]}
ripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkqp
kllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycg
vlyftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyr
epkdrse

Sequence, based on observed residues (ATOM records): (download)

>d1zjma3 d.218.1.2 (A:149-335) DNA polymerase beta, catalytic (31 kD) fragment {Human (Homo sapiens) [TaxId: 9606]}
ripreemlqmqdivlnevkkvdseyiatvcgsfrrgaessgdmdvllthpsftsestkll
hqvveqlqkvhfitdtlskgetkfmgvcqlpskndekeyphrridirlipkdqyycgvly
ftgsdifnknmrahalekgftineytirplgvtgvageplpvdsekdifdyiqwkyrepk
drse

SCOP Domain Coordinates for d1zjma3:

Click to download the PDB-style file with coordinates for d1zjma3.
(The format of our PDB-style files is described here.)

Timeline for d1zjma3: