Lineage for d1zdga_ (1zdg A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2898275Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2898276Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2899110Family c.68.1.14: Glycogenin [75273] (2 proteins)
  6. 2899111Protein Glycogenin [75274] (2 species)
  7. 2899135Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [75275] (15 PDB entries)
  8. 2899147Domain d1zdga_: 1zdg A: [124940]
    automated match to d1zcya1
    complexed with mn, so4, upg; mutant

Details for d1zdga_

PDB Entry: 1zdg (more details), 2.3 Å

PDB Description: ser159 mutant of glycogenin complexed with udp-glucose and manganese
PDB Compounds: (A:) glycogenin-1

SCOPe Domain Sequences for d1zdga_:

Sequence, based on SEQRES records: (download)

>d1zdga_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
mtdqafvtlttndayakgalvlgsslkqhrtsrrlavlttpqvsdtmrkaleivfdevit
vdildsgdsahltlmkrpelgvtltklhcwsltqyskcvfmdadtlvlaniddlfereel
saapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfsggdqgllntffnswattdir
khlpfiynlssisiysylpafkafganakvvhflgqtkpwnytydtktksvrseghdptm
thpqflnvwwdifttsvvpllqqf

Sequence, based on observed residues (ATOM records): (download)

>d1zdga_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
mtdqafvtlttndayakgalvlgsslkqhrtsrrlavlttpqvsdtmrkaleivfdevit
vdildsgdsahltlmkrpelgvtltklhcwsltqyskcvfmdadtlvlaniddlfereel
saapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfsggdqgllntffnswattdir
khlpfiynlssisiysylpafkafganakvvhflgqtkpwnytydtktksvrsmthpqfl
nvwwdifttsvvpllqqf

SCOPe Domain Coordinates for d1zdga_:

Click to download the PDB-style file with coordinates for d1zdga_.
(The format of our PDB-style files is described here.)

Timeline for d1zdga_: