SCOP 1.73: Domain d1zdfa1: 1zdf A:1-263

Lineage for d1zdfa1 (1zdf A:1-263)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (15 families)

5. Family c.68.1.14: Glycogenin [75273] (1 protein)

6. Protein Glycogenin [75274] (1 species)

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [75275] (9 PDB entries)

8. Domain d1zdfa1: 1zdf A:1-263 [124939]
   automatically matched to 1ZCU A:1-265
   complexed with mn, so4, upg; mutant

Details for d1zdfa1

PDB Entry: 1zdf, 2.45 Å

PDB Description: ser162 mutant of glycogenin complexed with udp-glucose and manganese

PDB Compounds: (A:) glycogenin-1

SCOP Domain Sequences for d1zdfa1:

Sequence, based on SEQRES records:

>d1zdfa1 c.68.1.14 (A:1-263) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
tdqafvtlttndayakgalvlgsslkqhrtsrrlavlttpqvsdtmrkaleivfdevitv
dildsgdsahltlmkrpelgvtltklhcwsltqyskcvfmdadtlvlaniddlfereels
aapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfdggsqgllntffnswattdirk
hlpfiynlssisiysylpafkafganakvvhflgqtkpwnytydtktksvrseghdptmt
hpqflnvwwdifttsvvpllqqf

Sequence, based on observed residues (ATOM records):

>d1zdfa1 c.68.1.14 (A:1-263) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
tdqafvtlttndayakgalvlgsslkqhrtsrrlavlttpqvsdtmrkaleivfdevitv
dildsgdsahltlmkrpelgvtltklhcwsltqyskcvfmdadtlvlaniddlfereels
aapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfdggsqgllntffnswattdirk
hlpfiynlssisiysylpafkafganakvvhflgqtkpwnytydtktksvrsmthpqfln
vwwdifttsvvpllqqf

Timeline for d1zdfa1:

• d1zdfa1 is new in SCOP 1.73
  
• d1zdfa1 appears in SCOP 1.75
  
• d1zdfa1 appears in the current release, SCOPe 2.08, called d1zdfa_