Lineage for d1zdfa_ (1zdf A:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2133075Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. 2133076Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families) (S)
  5. 2133793Family c.68.1.14: Glycogenin [75273] (2 protein domains)
  6. 2133794Protein Glycogenin [75274] (2 species)
  7. 2133815Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [75275] (15 PDB entries)
  8. 2133826Domain d1zdfa_: 1zdf A: [124939]
    automated match to d1zcua1
    complexed with mn, so4, upg; mutant

Details for d1zdfa_

PDB Entry: 1zdf (more details), 2.45 Å

PDB Description: ser162 mutant of glycogenin complexed with udp-glucose and manganese
PDB Compounds: (A:) glycogenin-1

SCOPe Domain Sequences for d1zdfa_:

Sequence, based on SEQRES records: (download)

>d1zdfa_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
mtdqafvtlttndayakgalvlgsslkqhrtsrrlavlttpqvsdtmrkaleivfdevit
vdildsgdsahltlmkrpelgvtltklhcwsltqyskcvfmdadtlvlaniddlfereel
saapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfdggsqgllntffnswattdir
khlpfiynlssisiysylpafkafganakvvhflgqtkpwnytydtktksvrseghdptm
thpqflnvwwdifttsvvpllqqf

Sequence, based on observed residues (ATOM records): (download)

>d1zdfa_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
mtdqafvtlttndayakgalvlgsslkqhrtsrrlavlttpqvsdtmrkaleivfdevit
vdildsgdsahltlmkrpelgvtltklhcwsltqyskcvfmdadtlvlaniddlfereel
saapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfdggsqgllntffnswattdir
khlpfiynlssisiysylpafkafganakvvhflgqtkpwnytydtktksvrsmthpqfl
nvwwdifttsvvpllqqf

SCOPe Domain Coordinates for d1zdfa_:

Click to download the PDB-style file with coordinates for d1zdfa_.
(The format of our PDB-style files is described here.)

Timeline for d1zdfa_: