Lineage for d1zccf1 (1zcc F:1-235)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 685559Superfamily c.1.18: PLC-like phosphodiesterases [51695] (3 families) (S)
  5. 685598Family c.1.18.3: Glycerophosphoryl diester phosphodiesterase [89508] (4 proteins)
    Pfam PF03009
  6. 685607Protein Glycerophosphodiester phosphodiesterase UgpQ [141866] (1 species)
  7. 685608Species Agrobacterium tumefaciens [TaxId:358] [141867] (1 PDB entry)
  8. 685612Domain d1zccf1: 1zcc F:1-235 [124906]
    automatically matched to 1ZCC A:1-240
    complexed with act, so4

Details for d1zccf1

PDB Entry: 1zcc (more details), 2.5 Å

PDB Description: crystal structure of glycerophosphodiester phosphodiesterase from agrobacterium tumefaciens str.c58
PDB Compounds: (F:) glycerophosphodiester phosphodiesterase

SCOP Domain Sequences for d1zccf1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zccf1 c.1.18.3 (F:1-235) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}
mtkivshrganrfapentfaaadlalqqgadyieldvresadgvlyvihdetldrttngt
gpvghmlsseidtldaggwfddrfkgaivprldaylehlrgragvyielkycdpakvaal
vrhlgmvrdtfyfsfseemrqglqsiapefrrmmtldiakspslvgavhhasiieitpaq
mrrpgiieasrkagleimvyyggddmavhreiatsdvdyinldrpdlfaavrsgm

SCOP Domain Coordinates for d1zccf1:

Click to download the PDB-style file with coordinates for d1zccf1.
(The format of our PDB-style files is described here.)

Timeline for d1zccf1: