SCOPe 2.01: Domain d1zcca1: 1zcc A:1-240

Lineage for d1zcca1 (1zcc A:1-240)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.18: PLC-like phosphodiesterases [51695] (4 families)

5. Family c.1.18.3: Glycerophosphoryl diester phosphodiesterase [89508] (5 proteins)
   Pfam PF03009

6. Protein Glycerophosphodiester phosphodiesterase UgpQ [141866] (1 species)

7. Species Agrobacterium tumefaciens [TaxId:358] [141867] (1 PDB entry)
   Uniprot Q8U887 1-240

8. Domain d1zcca1: 1zcc A:1-240 [124903]
   Other proteins in same PDB: d1zccb_, d1zccc_, d1zccd_, d1zcce_, d1zccf_
   complexed with act, so4

Details for d1zcca1

PDB Entry: 1zcc, 2.5 Å

PDB Description: crystal structure of glycerophosphodiester phosphodiesterase from agrobacterium tumefaciens str.c58

PDB Compounds: (A:) glycerophosphodiester phosphodiesterase

SCOPe Domain Sequences for d1zcca1:

Sequence; same for both SEQRES and ATOM records:

>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}
mtkivshrganrfapentfaaadlalqqgadyieldvresadgvlyvihdetldrttngt
gpvghmlsseidtldaggwfddrfkgaivprldaylehlrgragvyielkycdpakvaal
vrhlgmvrdtfyfsfseemrqglqsiapefrrmmtldiakspslvgavhhasiieitpaq
mrrpgiieasrkagleimvyyggddmavhreiatsdvdyinldrpdlfaavrsgmaelll

Timeline for d1zcca1:

• d1zcca1 first appeared in SCOP 1.73
  
• d1zcca1 appears in SCOP 1.75
  
• d1zcca1 appears in SCOPe 2.02
  
• d1zcca1 appears in the current release, SCOPe 2.08