Lineage for d1zc8k1 (1zc8 K:1-130)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075123Fold b.111: Small protein B (SmpB) [74981] (1 superfamily)
    barrel, closed; n=6, S=8, greek-key, partial similarity to the OB-fold
  4. 2075124Superfamily b.111.1: Small protein B (SmpB) [74982] (1 family) (S)
  5. 2075125Family b.111.1.1: Small protein B (SmpB) [74983] (1 protein)
  6. 2075126Protein Small protein B (SmpB) [74984] (2 species)
    tmRNA-binding protein; SsrA-binding protein
  7. 2075131Species Thermus thermophilus [TaxId:274] [82130] (5 PDB entries)
    Uniprot Q8RR57 4-123
  8. 2075140Domain d1zc8k1: 1zc8 K:1-130 [124892]
    Other proteins in same PDB: d1zc8y1, d1zc8y2, d1zc8y3
    automatically matched to d1k8ha_
    protein/RNA complex

Details for d1zc8k1

PDB Entry: 1zc8 (more details), 13 Å

PDB Description: Coordinates of tmRNA, SmpB, EF-Tu and h44 fitted into Cryo-EM map of the 70S ribosome and tmRNA complex
PDB Compounds: (K:) SsrA-binding protein

SCOPe Domain Sequences for d1zc8k1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zc8k1 b.111.1.1 (K:1-130) Small protein B (SmpB) {Thermus thermophilus [TaxId: 274]}

SCOPe Domain Coordinates for d1zc8k1:

Click to download the PDB-style file with coordinates for d1zc8k1.
(The format of our PDB-style files is described here.)

Timeline for d1zc8k1: