Lineage for d1zbra1 (1zbr A:3-341)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2537906Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 2537907Superfamily d.126.1: Pentein [55909] (8 families) (S)
  5. 2537992Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
    Pfam PF04371; functionally related to the amidinotransferase, similar active site
  6. 2538008Protein Putative peptidyl-arginine deiminase [111158] (3 species)
  7. 2538014Species Porphyromonas gingivalis [TaxId:837] [143808] (1 PDB entry)
    Uniprot Q7MXM8 3-341
  8. 2538015Domain d1zbra1: 1zbr A:3-341 [124868]
    Other proteins in same PDB: d1zbrb_

Details for d1zbra1

PDB Entry: 1zbr (more details), 2.6 Å

PDB Description: crystal structure of the putative arginine deiminase from porphyromonas gingivalis, northeast structural genomics target pgr3
PDB Compounds: (A:) conserved hypothetical protein

SCOPe Domain Sequences for d1zbra1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1zbra1 d.126.1.6 (A:3-341) Putative peptidyl-arginine deiminase {Porphyromonas gingivalis [TaxId: 837]}
krlflpewapqeavqltwphdrtdwaymldevetcfvriatailrherlivvcpdrkrvf
gllppelhhrlycfelpsndtwardhggislladgrpmiadfafngwgmkfaahhdnlit
rrlhalglfaegvtldnrlafvleggaletdgegtllttdsclfepnrnaglsrtaiidt
lkeslgvsrvlslrhgalagddtdghidtlarfvdtrtivyvrsedpsdehysdltameq
elkelrrpdgqpyrlvplpmaealydgadrlpatyanfliingavlvptydshldavals
vmqglfpdrevigidcrplvkqhgslhcvtmqypqgfir

SCOPe Domain Coordinates for d1zbra1:

Click to download the PDB-style file with coordinates for d1zbra1.
(The format of our PDB-style files is described here.)

Timeline for d1zbra1:

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Domains from other chains:
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d1zbrb_